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  5. Solyc09g064800.3.1

Solyc09g064800.3.1 (DBE1, ATISA2, BE2,...)


Aliases : DBE1, ATISA2, BE2, ISA2, Solyc09g064800

Description : starch debranching enzyme. starch-debranching isoamylase-type enzyme


Gene families : OG0001139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g064800.3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT4G09020 ATISA3, ISA3 isoamylase 3 0.04 OrthoFinder output from all 47 species
Adi_g074287 DBE1, ATISA2, BE2, ISA2 component *(ISA2) of ISA1-ISA2 isoamylase heterodimer &... 0.02 OrthoFinder output from all 47 species
Cba_g33014 ATISA1, ISA1 component *(ISA1) of ISA1-ISA2 isoamylase heterodimer &... 0.03 OrthoFinder output from all 47 species
GSVIVT01011096001 DBE1, ATISA2, BE2, ISA2 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
LOC_Os08g40930.1 ATISA1, ISA1,... starch debranching enzyme. starch-debranching... 0.03 OrthoFinder output from all 47 species
MA_10431226g0020 ATISA1, ISA1 starch debranching enzyme. starch-debranching... 0.03 OrthoFinder output from all 47 species
Nbi_g06253 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g48656 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.03 OrthoFinder output from all 47 species
Sam_g08066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32210 DBE1, ATISA2, BE2, ISA2 component *(ISA2) of ISA1-ISA2 isoamylase heterodimer &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0018298 obsolete protein-chromophore linkage IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 223 310
IPR006047 Glyco_hydro_13_cat_dom 378 466
No external refs found!