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  5. Solyc09g059430.3.1

Solyc09g059430.3.1 (RIN4, Solyc09g059430)


Aliases : RIN4, Solyc09g059430

Description : RIN4 effector-triggered immunity RPM1-interacting factor


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g059430.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G25070 RIN4 RPM1 interacting protein 4 0.02 OrthoFinder output from all 47 species
Ala_g01201 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Als_g50234 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species
Aop_g03098 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Azfi_s0111.g045667 RIN4 not classified & original description: CDS=218-763 0.02 OrthoFinder output from all 47 species
Cba_g72840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004747001 RIN4 External stimuli response.biotic stress.pathogen... 0.07 OrthoFinder output from all 47 species
GSVIVT01020994001 RIN4 External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
LOC_Os06g17870.1 LOC_Os06g17870 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g15850 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Pir_g23580 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Sam_g01442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003639_P001 RIN4, Zm00001e003639 RIN4 effector-triggered immunity RPM1-interacting factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 189 223
No external refs found!