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  5. Solyc09g018450.3.1

Solyc09g018450.3.1 (UBA1, MOS5, ATUBA1,...)


Aliases : UBA1, MOS5, ATUBA1, Solyc09g018450

Description : ubiquitin-activating E1 protein


Gene families : OG0000675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g018450.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00065050 UBA1, MOS5,... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AT5G06460 ATUBA2, UBA 2 ubiquitin activating enzyme 2 0.05 OrthoFinder output from all 47 species
Adi_g001009 UBA1, MOS5, ATUBA1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g081325 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g03400 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18272 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02615 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19300.t1 UBA1, MOS5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27111.t1 UBA1, MOS5,... E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0115.g046242 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g62755 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G093700.1 UBA1, MOS5,... E1 ubiquitin-activating enzyme & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z131100.1 ATUBA2, UBA 2,... E1 ubiquitin-activating enzyme & original description:... 0.06 OrthoFinder output from all 47 species
Cre09.g386400 ATUBA2, UBA 2 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dcu_g05814 ATUBA2, UBA 2 E1 ubiquitin-activating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09946 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08656 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024680001 UBA1, MOS5, ATUBA1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_00042 UBA1, MOS5, ATUBA1 ubiquitin-activating E1 protein 0.04 OrthoFinder output from all 47 species
Gb_01549 UBA1, MOS5, ATUBA1 ubiquitin-activating E1 protein 0.02 OrthoFinder output from all 47 species
Gb_06843 UBA1, MOS5, ATUBA1 ubiquitin-activating E1 protein 0.04 OrthoFinder output from all 47 species
LOC_Os11g01510.2 UBA1, MOS5,... ubiquitin-activating E1 protein 0.04 OrthoFinder output from all 47 species
Len_g00759 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05461 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436758g0010 UBA1, MOS5, ATUBA1 Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum... 0.04 OrthoFinder output from all 47 species
Mp4g15300.1 ATUBA2, UBA 2 ubiquitin-activating E1 protein 0.04 OrthoFinder output from all 47 species
Msp_g05031 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36423 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10410 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06607 UBA1, MOS5, ATUBA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06608 ATUBA2, UBA 2 E1 ubiquitin-activating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42996 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11819 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30368 UBA1, MOS5, ATUBA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02388 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015761 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g12365 No alias E1 ubiquitin-activating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25172 No alias E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Smo145914 UBA1, MOS5, ATUBA1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Smo179776 UBA1, MOS5, ATUBA1 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Tin_g11189 UBA1, MOS5, ATUBA1 E1 ubiquiTin-activaTing enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009293_P001 ATUBA2, UBA 2,... ubiquitin-activating E1 protein 0.03 OrthoFinder output from all 47 species
Zm00001e023945_P001 UBA1, MOS5,... ubiquitin-activating E1 protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000594 ThiF_NAD_FAD-bd 85 460
IPR032420 E1_4HB 330 399
IPR000594 ThiF_NAD_FAD-bd 479 978
IPR019572 UBA_E1_SCCH 666 919
IPR018965 Ub-activating_enz_E1_C 990 1079
IPR032418 E1_FCCH 259 328
No external refs found!