Aliases : Solyc09g010650
Description : RING-H2 finger protein ATL33 OS=Arabidopsis thaliana (sp|o80927|atl33_arath : 84.0)
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00263220 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00006p00267830 | evm_27.TU.AmTr_v1... | Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00025p00229930 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00040p00197990 | ATL6,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AT1G15100 | RHA2A | RING-H2 finger A2A | 0.03 | OrthoFinder output from all 47 species | |
AT1G22500 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G43430 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G11360 | RHA1B | RING-H2 finger A1B | 0.03 | OrthoFinder output from all 47 species | |
AT4G11370 | RHA1A | RING-H2 finger A1A | 0.02 | OrthoFinder output from all 47 species | |
AT4G15975 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G17905 | ATL4H | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G01880 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G06490 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G58580 | ATL63, TL63 | TOXICOS EN LEVADURA 63 | 0.04 | OrthoFinder output from all 47 species | |
Aev_g02496 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g04680 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g04809 | BRH1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g08457 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g08587 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Als_g58281 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g32159 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g12490 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene12530.t1 | Aspi01Gene12530 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene66980.t1 | Aspi01Gene66980 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g07345 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.18G057600.1 | Ceric.18G057600 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.34G056700.1 | Ceric.34G056700 | not classified & original description: pacid=50623881... | 0.06 | OrthoFinder output from all 47 species | |
Dac_g14977 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g28798 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g06426 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g24586 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g25847 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g05771 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g10960 | ATL31, CNI1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01000538001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01038717001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
Gb_14762 | ATL2, TL2 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
Gb_20700 | BRH1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g45390.1 | LOC_Os02g45390 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os02g49710.1 | LOC_Os02g49710 | IDF1 iron uptake IRT1-ubiquitin ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g52210.1 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g44950.1 | LOC_Os08g44950 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g10385 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g29042 | XERICO | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g39385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_17390g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
MA_754688g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_786911g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Msp_g01499 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g14103 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g03798 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g04496 | DEP | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g32586 | DEP | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g11149 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pir_g15928 | ATL5 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g17726 | ATL31, CNI1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g55439 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g06737 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g17683 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0073.g017128 | No alias | not classified & original description: CDS=1-1311 | 0.05 | OrthoFinder output from all 47 species | |
Sam_g48654 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g087040.1.1 | Solyc02g087040 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Spa_g17343 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g29342 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e008560_P001 | RHA2A, Zm00001e008560 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e014764_P001 | Zm00001e014764 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e014832_P001 | Zm00001e014832 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e019438_P001 | Zm00001e019438 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e022781_P001 | Zm00001e022781 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023234_P001 | BRH1, Zm00001e023234 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e029032_P001 | Zm00001e029032 | RING-H2-class E3 ligase | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e030750_P001 | Zm00001e030750 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e036086_P001 | Zm00001e036086 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 76 | 120 |
No external refs found! |