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  5. Solyc09g009230.2.1

Solyc09g009230.2.1 (Solyc09g009230)


Aliases : Solyc09g009230

Description : UPF0481 protein At3g47200 OS=Arabidopsis thaliana (sp|q9sd53|y3720_arath : 297.0)


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g009230.2.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00068760 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00013p00069940 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00016p00254860 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00023p00150580 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00151010 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00023p00168910 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00023p00171820 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00033p00169500 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00033p00171210 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00278p00010750 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G65985 No alias Plant protein of unknown function (DUF247) 0.06 OrthoFinder output from all 47 species
AT1G67150 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT2G36430 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G47200 No alias Plant protein of unknown function (DUF247) 0.05 OrthoFinder output from all 47 species
AT3G47210 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.08 OrthoFinder output from all 47 species
AT3G50140 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT5G11290 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT5G22550 No alias Plant protein of unknown function (DUF247) 0.05 OrthoFinder output from all 47 species
Ala_g03111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02375 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08488.t1 Aspi01Gene08488 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08489.t1 Aspi01Gene08489 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08490.t1 Aspi01Gene08490 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08493.t1 Aspi01Gene08493 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29768.t1 Aspi01Gene29768 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48412.t1 Aspi01Gene48412 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene48413.t1 Aspi01Gene48413 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48414.t1 Aspi01Gene48414 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49158.t1 Aspi01Gene49158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61822.t1 Aspi01Gene61822 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70527.t1 Aspi01Gene70527 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72945.t1 Aspi01Gene72945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G018900.1 Ceric.06G018900 not classified & original description: pacid=50620412... 0.03 OrthoFinder output from all 47 species
Ceric.30G007100.1 Ceric.30G007100 not classified & original description: pacid=50608898... 0.04 OrthoFinder output from all 47 species
Dac_g36449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46391 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g11110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001131001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01014791001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017512001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01026858001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01027389001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033580001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035823001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_03494 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_11125 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_20041 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_20047 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_20052 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_27805 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_28287 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_28782 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_34674 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_34677 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_37280 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_37285 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_37287 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_41229 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os01g21650.1 LOC_Os01g21650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os01g38120.1 LOC_Os01g38120 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g42650.1 LOC_Os04g42650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g08120.1 LOC_Os06g08120 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
LOC_Os08g30520.1 LOC_Os08g30520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g33430.1 LOC_Os11g33430 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g33950.1 LOC_Os11g33950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g33970.1 LOC_Os11g33970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g34090.1 LOC_Os11g34090 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g00358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g35601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426384g0010 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10428428g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10434321g0020 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_109716g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_120599g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_120951g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_26069g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_413488g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6919317g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_749769g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_92471g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp2g23330.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp3g02930.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g27647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09735 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g26636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63876 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g63877 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc01g057260.4.1 Solyc01g057260 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g016020.1.1 Solyc04g016020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g019313.1.1 Solyc04g019313 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g099300.1.1 Solyc12g099300 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g06895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30858 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g37795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023471_P002 Zm00001e023471 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e024232_P001 Zm00001e024232 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 48 428
No external refs found!