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  5. Solyc09g009190.4.1

Solyc09g009190.4.1 (SBE2.2, Solyc09g009190)


Aliases : SBE2.2, Solyc09g009190

Description : starch branching enzyme


Gene families : OG0001102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g009190.4.1

Target Alias Description ECC score Gene Family Method Actions
AT2G36390 SBE2.1, BE3 starch branching enzyme 2.1 0.13 OrthoFinder output from all 47 species
AT5G03650 SBE2.2 starch branching enzyme 2.2 0.03 OrthoFinder output from all 47 species
Aev_g08813 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28543 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s3330.g115373 SBE2.2 starch branching enzyme & original description: CDS=1-1083 0.04 OrthoFinder output from all 47 species
Ceric.17G017100.1 SBE2.2, Ceric.17G017100 EC_2.4 glycosyltransferase & original description:... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021432.19 SBE2.2 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species
Cre06.g289850 SBE2.2 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Cre10.g444700 SBE2.1, BE3 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Dcu_g08904 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25153 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008673001 SBE2.1, BE3 Carbohydrate metabolism.starch... 0.05 OrthoFinder output from all 47 species
GSVIVT01033801001 SBE2.1, BE3 Carbohydrate metabolism.starch... 0.04 OrthoFinder output from all 47 species
LOC_Os02g32660.1 SBE2.2, LOC_Os02g32660 starch branching enzyme 0.03 OrthoFinder output from all 47 species
LOC_Os06g51084.1 SBE2.2, LOC_Os06g51084 starch branching enzyme 0.03 OrthoFinder output from all 47 species
Len_g13302 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
MA_15024g0020 SBE2.2 1,4-alpha-glucan-branching enzyme 1,... 0.07 OrthoFinder output from all 47 species
Ore_g09838 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Smo437348 SBE2.2 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Tin_g13238 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013321_P002 SBE2.2, Zm00001e013321 starch branching enzyme 0.04 OrthoFinder output from all 47 species
Zm00001e014711_P001 SBE2.2, Zm00001e014711 starch branching enzyme 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR006048 A-amylase/branching_C 759 853
IPR004193 Glyco_hydro_13_N 221 304
IPR006047 Glyco_hydro_13_cat_dom 370 441
No external refs found!