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Aliases : Solyc09g007230
Description : C3H zinc finger transcription factor
Gene families : OG0004039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004039_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc09g007230.3.1 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G20280 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0117.g046460 | No alias | regulatory protein of RNA homeostasis & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G076400.1 | Ceric.01G076400 | regulatory protein of RNA homeostasis & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000704.66 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31734 | No alias | regulatory protein of RNA homeostasis & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03565 | No alias | regulatory protein of RNA homeostasis & original... | 0.03 | OrthoFinder output from all 47 species | |
| Smo80672 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000149 | SNARE binding | IEP | HCCA |
| BP | GO:0000469 | cleavage involved in rRNA processing | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0019905 | syntaxin binding | IEP | HCCA |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | HCCA |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032378 | ZC3H15/TMA46_C | 217 | 295 |
| No external refs found! |