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  5. Solyc08g083170.1.1

Solyc08g083170.1.1 (Solyc08g083170)


Aliases : Solyc08g083170

Description : transcription factor (bHLH)


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g083170.1.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00225810 ATMYC2, MYC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00048410 BHLH42, TT8,... RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
AMTR_s00099p00127980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT1G32640 ATMYC2, MYC2,... Basic helix-loop-helix (bHLH) DNA-binding family protein 0.07 OrthoFinder output from all 47 species
AT2G46510 AIB, ATAIB ABA-inducible BHLH-type transcription factor 0.06 OrthoFinder output from all 47 species
AT4G00870 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G09820 BHLH42, TT8 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G17880 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.04 OrthoFinder output from all 47 species
Aev_g18919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13949 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21686 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29175 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30820 ATMYC2, MYC2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35731 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19786 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29942 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05305.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene07773.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53938.t1 Aspi01Gene53938 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59166.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29698 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G058100.1 Ceric.04G058100 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.13G040400.1 ATMYC2, MYC2,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g01751 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14107 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08225 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32437 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43924 BHLH42, TT8 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07082 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027162001 No alias Transcription factor bHLH13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01027412001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
Gb_32265 BHLH42, TT8 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
LOC_Os01g50940.1 AIB, ATAIB,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os04g47040.1 EGL1, EGL3,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os04g47080.1 EGL1, EGL3,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os09g34330.1 ATMYC2, MYC2,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os10g42430.1 ATMYC2, MYC2,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Len_g19788 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24742 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25473 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435905g0020 ATMYC2, MYC2,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_8255g0010 BHLH42, TT8 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_96585g0010 BHLH42, TT8 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Msp_g14087 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19111 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03760 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06669 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13494 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g42483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00636 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20238 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42582 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54759 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24355 BHLH42, TT8 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12962 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13609 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15562 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000372 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-1683 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013863 No alias bHLH-type transcription factor & original description: CDS=1-1902 0.03 OrthoFinder output from all 47 species
Sam_g19780 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g065100.3.1 BHLH42, TT8,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Spa_g26910 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38314 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52382 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12906 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002421_P001 ATMYC2, MYC2,... transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e020021_P001 AIB, ATAIB,... transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e037785_P002 ATMYC2, MYC2,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 215 260
IPR025610 MYC/MYB_N 17 59
IPR025610 MYC/MYB_N 63 161
No external refs found!