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  5. Solyc08g083010.3.1

Solyc08g083010.3.1 (Solyc08g083010)


Aliases : Solyc08g083010

Description : no hits & (original description: none)


Gene families : OG0006391 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g083010.3.1

Target Alias Description ECC score Gene Family Method Actions
AT4G24090 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.08 OrthoFinder output from all 47 species
Adi_g023580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g023581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01377 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20479 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene13694.t1 Aspi01Gene13694 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g28428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G048300.1 Ceric.02G048300 not classified & original description: pacid=50584919... 0.08 OrthoFinder output from all 47 species
Dcu_g00690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09401 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019640001 No alias No description available 0.09 OrthoFinder output from all 47 species
LOC_Os09g35990.1 LOC_Os09g35990 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Len_g06939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_24252g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g15710.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g07238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18574 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012199 No alias not classified & original description: CDS=892-1812 0.03 OrthoFinder output from all 47 species
Spa_g10281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!