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  5. Solyc08g082210.4.1

Solyc08g082210.4.1 (Solyc08g082210)


Aliases : Solyc08g082210

Description : transcription factor (DREB)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g082210.4.1

Target Alias Description ECC score Gene Family Method Actions
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G20880 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G28140 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g04104 TINY2 subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ala_g21684 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25683 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19243 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g27595 DEAR4, RAP2.10 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.01 OrthoFinder output from all 47 species
GSVIVT01001089001 Rap2.6L RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
LOC_Os04g46240.1 ERF5, ATERF-5,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os04g46250.1 ERF-6-6, ERF6,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
MA_40048g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_411387g0010 ERF2, ATERF2, ATERF-2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_4182g0010 Rap2.6L no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Ore_g26705 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g33731 RAP2.11 transcription factor *(ERN1) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g38211 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04539 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Spa_g11893 No alias subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 110 159
No external refs found!