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  5. Solyc08g081990.3.1

Solyc08g081990.3.1 (SPA2, Solyc08g081990)


Aliases : SPA2, Solyc08g081990

Description : protein kinase (PEK). regulator component SPA of COP1-SPA E3 ligase subcomplex. regulator component SPA of COP1-SPA light signal transduction ubiquitin E3 ligase complex


Gene families : OG0000638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g081990.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G53090 SPA4 SPA1-related 4 0.06 OrthoFinder output from all 47 species
AT3G15354 SPA3 SPA1-related 3 0.06 OrthoFinder output from all 47 species
AT4G11110 SPA2 SPA1-related 2 0.07 OrthoFinder output from all 47 species
Aop_g21616 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008529 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020964.35 FUS1, EMB168,... Protein modification.phosphorylation.PEK kinase 0.01 OrthoFinder output from all 47 species
Cre02.g085050 FUS1, EMB168,... E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01019492001 SPA2 External stimuli response.light.red/far red... 0.04 OrthoFinder output from all 47 species
Gb_02506 SPA1 protein kinase (PEK). regulator component SPA of... 0.04 OrthoFinder output from all 47 species
Mp5g12010.1 FUS1, EMB168,... protein kinase (PEK). component COP1 of COP1-SPA E3... 0.04 OrthoFinder output from all 47 species
Msp_g14475 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Sam_g30164 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Smo141846 FUS1, EMB168,... External stimuli response.light.red/far red... 0.02 OrthoFinder output from all 47 species
Zm00001e015983_P001 FUS1, EMB168,... protein kinase (PEK). component COP1 of COP1-SPA E3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 913 944
IPR001680 WD40_repeat 823 860
No external refs found!