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Aliases : BRH1, Solyc08g081370
Description : E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana (sp|q9sus5|rha1b_arath : 94.7)
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00263220 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00059p00176670 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00077p00074350 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G24580 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G17450 | RHA3A | RING-H2 finger A3A | 0.03 | OrthoFinder output from all 47 species | |
| AT2G37580 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G18930 | No alias | RING/U-box superfamily protein | 0.1 | OrthoFinder output from all 47 species | |
| AT3G43430 | No alias | RING/U-box superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT3G61460 | BRH1 | brassinosteroid-responsive RING-H2 | 0.04 | OrthoFinder output from all 47 species | |
| AT4G11360 | RHA1B | RING-H2 finger A1B | 0.06 | OrthoFinder output from all 47 species | |
| AT4G24015 | No alias | RING/U-box superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT4G33565 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G05280 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03117 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g07665 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g08457 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g10391 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04740 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g29275 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g11831 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13275 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g70090 | ATL31, CNI1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene00937.t1 | BRH1, Aspi01Gene00937 | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14350.t1 | Aspi01Gene14350 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene20771.t1 | Aspi01Gene20771 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene27966.t1 | Aspi01Gene27966 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene36586.t1 | Aspi01Gene36586 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene42978.t2 | Aspi01Gene42978 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene46829.t2 | Aspi01Gene46829 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene49237.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0098.g043930 | No alias | not classified & original description: CDS=29-547 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0179.g056226 | ATL4H | not classified & original description: CDS=1-969 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g43673 | No alias | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G091800.1 | Ceric.01G091800 | not classified & original description: pacid=50591615... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.03G012300.1 | BRH1, Ceric.03G012300 | not classified & original description: pacid=50572071... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G020900.1 | ATL43, Ceric.22G020900 | not classified & original description: pacid=50614198... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.36G050500.1 | BRH1, Ceric.36G050500 | not classified & original description: pacid=50569096... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03534 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g04583 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g16303 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g36466 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g40176 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g02548 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g26675 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g28710 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01009096001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01018343001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027769001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_14777 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_15297 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_22087 | No alias | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
| Gb_26582 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_32878 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g55110.1 | LOC_Os01g55110 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g64620.1 | LOC_Os01g64620 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g14990.1 | LOC_Os02g14990 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os02g15080.1 | LOC_Os02g15080 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g36330.1 | LOC_Os02g36330 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g46600.1 | LOC_Os02g46600 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g16970.1 | LOC_Os04g16970 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os05g45060.1 | LOC_Os05g45060 | RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g24490.1 | LOC_Os12g24490 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g42540.1 | LOC_Os12g42540 | RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g56978 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g39367 | RHA3B | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_85088g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_932090g0010 | ATL6 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g04600.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g09561 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g13489 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g18716 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g31921 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g17181 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g26349 | ATL3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g06664 | BRH1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g10560 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26608 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g01265 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g27082 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10849 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g13428 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ppi_g39720 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g61044 | RHA3A | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003753 | RHA3B | not classified & original description: CDS=1-771 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0010.g004696 | ATRING1, RING1 | not classified & original description: CDS=1-576 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0074.g017298 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0081.g018006 | XERICO | not classified & original description: CDS=1-537 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0116.g021081 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g03685 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07697 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25474 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g25475 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37451 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g52337 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g038805.1.1 | Solyc02g038805 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
| Solyc12g087840.1.1 | Solyc12g087840 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g29391 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g48427 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g25559 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g28275 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000398_P001 | Zm00001e000398 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e008560_P001 | RHA2A, Zm00001e008560 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e015259_P001 | Zm00001e015259 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e016474_P001 | Zm00001e016474 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e023238_P001 | Zm00001e023238 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023585_P001 | Zm00001e023585 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031874_P001 | Zm00001e031874 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034008_P001 | Zm00001e034008 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034025_P001 | RHA3A, Zm00001e034025 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e034421_P001 | ATL6, Zm00001e034421 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e034829_P001 | RHA3A, Zm00001e034829 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 85 | 129 |
| No external refs found! |