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Aliases : Solyc08g079250
Description : no hits & (original description: none)
Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00006p00264910 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT1G55260 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G62790 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G27130 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G48130 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G22620 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G43720 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.05 | OrthoFinder output from all 47 species | |
| AT4G12360 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012882 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g027936 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g04739 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g28872 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g38941 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06034 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g15133 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene03812.t1 | Aspi01Gene03812 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene16579.t1 | Aspi01Gene16579 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene29219.t1 | Aspi01Gene29219 | arabinogalactan protein *(Xylogen) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033620 | No alias | not classified & original description: CDS=175-666 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g01588 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G102400.1 | Ceric.01G102400 | not classified & original description: pacid=50593041... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.05G095500.1 | Ceric.05G095500 | not classified & original description: pacid=50577222... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G058500.1 | Ceric.09G058500 | not classified & original description: pacid=50586776... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G092700.1 | Ceric.12G092700 | not classified & original description: pacid=50601364... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g04455 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g11056 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01001177001 | No alias | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01025413001 | No alias | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_02455 | No alias | xylogen-type arabinogalactan protein | 0.04 | OrthoFinder output from all 47 species | |
| Gb_02456 | No alias | xylogen-type arabinogalactan protein | 0.04 | OrthoFinder output from all 47 species | |
| Gb_13133 | No alias | xylogen-type arabinogalactan protein | 0.02 | OrthoFinder output from all 47 species | |
| Gb_24349 | No alias | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g09230.1 | LOC_Os03g09230 | xylogen-type arabinogalactan protein | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g57970.2 | LOC_Os03g57970 | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g49770.1 | LOC_Os06g49770 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g07860.1 | LOC_Os07g07860 | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| Len_g14614 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g28585 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_43542g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06696 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04557 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27615 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g44354 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04354 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g12691 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g19919 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g61681 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008667 | No alias | not classified & original description: CDS=1-402 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0056.g014600 | No alias | not classified & original description: CDS=65-802 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0169.g024327 | No alias | not classified & original description: CDS=1-432 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0169.g024328 | No alias | not classified & original description: CDS=429-857 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0169.g024331 | No alias | not classified & original description: CDS=1491-1979 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s2896.g028490 | No alias | not classified & original description: CDS=1-624 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g02332 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g073680.4.1 | Solyc01g073680 | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g005210.4.1 | Solyc03g005210 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g054030.2.1 | Solyc06g054030 | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g073660.3.1 | Solyc06g073660 | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g065440.4.1 | EDA4, Solyc09g065440 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g082300.3.1 | EDA4, Solyc09g082300 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g13589 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001521_P002 | Zm00001e001521 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005959_P003 | Zm00001e005959 | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005960_P003 | EDA4, Zm00001e005960 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005961_P001 | Zm00001e005961 | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010812_P001 | Zm00001e010812 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e022825_P001 | Zm00001e022825 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016140 | Bifunc_inhib/LTP/seed_store | 60 | 141 |
| No external refs found! |