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Aliases : Solyc08g078610
Description : no hits & (original description: none)
Gene families : OG0002612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002612_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc08g078610.4.1 | |
| Cluster | HCCA: Cluster_74 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g10683 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g08685 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32617 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g18188 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04433 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07432 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G063500.1 | Ceric.07G063500 | not classified & original description: pacid=50626237... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000842.29 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g04655 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g02948 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g03624 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028150001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06444 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g14920.1 | LOC_Os01g14920 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g01309 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_117242g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g09390.1 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g45163 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g45165 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g14626 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07458 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28547 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g08664 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e025585_P002 | Zm00001e025585 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000176 | nuclear exosome (RNase complex) | IEP | HCCA |
| CC | GO:0000178 | exosome (RNase complex) | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| MF | GO:0031491 | nucleosome binding | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1905354 | exoribonuclease complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |