Solyc08g076920.3.1 (AGD9, Solyc08g076920)

Aliases : AGD9, Solyc08g076920

Description : class II ARF-GAP ARF-GTPase-activating protein

Gene families : OG0001922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001922_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g076920.3.1
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
Adi_g064067	AGD8	class II ARF-GAP ARF-GTPase-activating protein &...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021464.57	AGD6	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.02	OrthoFinder output from all 47 species
Dcu_g04662	AGD8	class II ARF-GAP ARF-GTPase-activating protein &...	0.03	OrthoFinder output from all 47 species
Ehy_g11258	AGD8	class II ARF-GAP ARF-GTPase-activating protein &...	0.02	OrthoFinder output from all 47 species
LOC_Os03g63710.1	AGD8, LOC_Os03g63710	class II ARF-GAP ARF-GTPase-activating protein	0.06	OrthoFinder output from all 47 species
MA_18779g0010	AGD8	class II ARF-GAP ARF-GTPase-activating protein	0.03	OrthoFinder output from all 47 species
Nbi_g29700	AGD8	class II ARF-GAP ARF-GTPase-activating protein &...	0.04	OrthoFinder output from all 47 species
Spa_g18253	AGD8	class II ARF-GAP ARF-GTPase-activating protein &...	0.03	OrthoFinder output from all 47 species
Spa_g39446	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e006404_P001	AGD8, Zm00001e006404	class II ARF-GAP ARF-GTPase-activating protein	0.05	OrthoFinder output from all 47 species
Zm00001e011636_P001	AGD9, Zm00001e011636	class II ARF-GAP ARF-GTPase-activating protein	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005096	GTPase activator activity	IEA	Interproscan
MF	GO:0008047	enzyme activator activity	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071586	CAAX-box protein processing	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001164	ArfGAP_dom	12	115

External Links

No external refs found!