Solyc08g076390.3.1 (Solyc08g076390)


Aliases : Solyc08g076390

Description : histone demethylase (PKDM8). transcription factor (JUMONJI)


Gene families : OG0002434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002434_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g076390.3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G46910 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.03 OrthoFinder output from all 47 species
Aev_g18987 No alias histone demethylase *(PKDM8) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g19823 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0016.g014270 No alias histone demethylase *(PKDM8) & original description: CDS=141-2051 0.03 OrthoFinder output from all 47 species
Dac_g33188 No alias histone demethylase *(PKDM8) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07850 No alias histone demethylase *(PKDM8) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g46930.1 LOC_Os02g46930 transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species
Len_g20483 No alias histone demethylase *(PKDM8) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58593 No alias histone demethylase *(PKDM8) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05487 No alias histone demethylase *(PKDM8) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09345 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41949 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012910 No alias histone demethylase *(PKDM8) & original description: CDS=45-3857 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0239.g026600 No alias histone demethylase *(PKDM8) & original description: CDS=142-3609 0.02 OrthoFinder output from all 47 species
Spa_g26750 No alias histone demethylase *(PKDM8) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002479_P001 Zm00001e002479 histone demethylase (PKDM8). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
Zm00001e012998_P005 Zm00001e012998 histone demethylase (PKDM8). transcription factor (JUMONJI) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 497 548
IPR003349 JmjN 101 133
IPR003347 JmjC_dom 277 400
No external refs found!