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  5. Solyc08g076130.3.1

Solyc08g076130.3.1 (VPS25, Solyc08g076130)


Aliases : VPS25, Solyc08g076130

Description : component VPS25 of ESCRT-II complex


Gene families : OG0005916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g076130.3.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0045.g030038 VPS25 component *(VPS25) of ESCRT-II complex & original... 0.03 OrthoFinder output from all 47 species
Lfl_g05174 VPS25 component *(VPS25) of ESCRT-II complex & original... 0.03 OrthoFinder output from all 47 species
Mp3g14870.1 VPS25 component VPS25 of ESCRT-II complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEA Interproscan
BP GO:0071985 multivesicular body sorting pathway IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
InterPro domains Description Start Stop
IPR008570 ESCRT-II_cplx_Vps25-sub 13 145
No external refs found!