Solyc08g076080.3.1 (XTR4, XTH30, Solyc08g076080)

Aliases : XTR4, XTH30, Solyc08g076080

Description : Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana (sp|q38908|xth30_arath : 404.0) & Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 193.5)

Gene families : OG0000942 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000942_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g076080.3.1
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00025540	EXGT-A2, XTH28,...	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	OrthoFinder output from all 47 species
AMTR_s00048p00113910	XTH27, ATXTH27,...	Enzyme classification.EC_2 transferases.EC_2.4...	0.05	OrthoFinder output from all 47 species
Dcu_g19892	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g00711	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01011603001	XTH27, ATXTH27, EXGT-A3	Probable xyloglucan endotransglucosylase/hydrolase...	0.05	OrthoFinder output from all 47 species
Len_g23384	XTR4, XTH30	EC_2.4 glycosyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Msp_g12480	XTR4, XTH30	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g02177	XTR4, XTH30	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g30300	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc11g066270.3.1	XTH32, Solyc11g066270	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
Tin_g00637	XTR4, XTH30	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
CC	GO:0018995	host cellular component	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
CC	GO:0033643	host cell part	IEP	HCCA
CC	GO:0033646	host intracellular part	IEP	HCCA
CC	GO:0033647	host intracellular organelle	IEP	HCCA
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
CC	GO:0042025	host cell nucleus	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000757	GH16	54	230
IPR010713	XET_C	268	308

External Links

No external refs found!

Solyc08g076080.3.1 (XTR4, XTH30, Solyc08g076080)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation