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  5. Solyc08g074590.2.1

Solyc08g074590.2.1 (ROL5, Solyc08g074590)


Aliases : ROL5, Solyc08g074590

Description : component CTU1 of CTU1-CTU2 tRNA thiouridylase complex


Gene families : OG0005677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g074590.2.1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021590.13 ROL5 RNA processing.RNA modification.thiolation.CTU1-URM1... 0.01 OrthoFinder output from all 47 species
Mp4g16800.1 ROL5 component CTU1 of CTU1-CTU2 tRNA thiouridylase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR011063 TilS/TtcA_N 60 198
No external refs found!