Solyc08g068370.3.1 (Solyc08g068370)

Aliases : Solyc08g068370

Description : TOM endomembrane trafficking associated protein

Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g068370.3.1
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00130p00102230	evm_27.TU.AmTr_v1...	Vesicle trafficking.endomembrane trafficking.protein...	0.03	OrthoFinder output from all 47 species
AT2G38410	No alias	ENTH/VHS/GAT family protein	0.03	OrthoFinder output from all 47 species
AT4G32760	No alias	ENTH/VHS/GAT family protein	0.04	OrthoFinder output from all 47 species
AT5G16880	No alias	Target of Myb protein 1	0.04	OrthoFinder output from all 47 species
Adi_g080534	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g36646	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g17486	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g01215	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g10029	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0123.g048383	No alias	ubiquitin adaptor protein *(TOL) & original description:...	0.03	OrthoFinder output from all 47 species
Azfi_s0401.g068259	No alias	ubiquitin adaptor protein *(TOL) & original description:...	0.04	OrthoFinder output from all 47 species
Cba_g12993	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.35G060000.1	Ceric.35G060000	ubiquitin adaptor protein *(TOL) & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g05692	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g06412	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g10821	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01035657001	No alias	Vesicle trafficking.endomembrane trafficking.protein...	0.04	OrthoFinder output from all 47 species
LOC_Os01g12880.1	LOC_Os01g12880	TOM endomembrane trafficking associated protein	0.04	OrthoFinder output from all 47 species
LOC_Os05g39760.1	LOC_Os05g39760	TOM endomembrane trafficking associated protein	0.02	OrthoFinder output from all 47 species
LOC_Os06g22650.1	LOC_Os06g22650	TOM endomembrane trafficking associated protein	0.03	OrthoFinder output from all 47 species
Len_g08802	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g27437	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.04	OrthoFinder output from all 47 species
MA_10361509g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_10426979g0010	No alias	TOM1-like protein 3 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Mp1g23050.1	No alias	TOM endomembrane trafficking associated protein	0.04	OrthoFinder output from all 47 species
Ore_g15383	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g07313	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g15242	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g15243	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g29590	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Smo67275	No alias	Vesicle trafficking.endomembrane trafficking.protein...	0.03	OrthoFinder output from all 47 species
Spa_g05647	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g16950	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g28672	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g11081	No alias	ubiquiTin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e019421_P001	Zm00001e019421	TOM endomembrane trafficking associated protein	0.02	OrthoFinder output from all 47 species
Zm00001e026110_P002	Zm00001e026110	TOM endomembrane trafficking associated protein	0.04	OrthoFinder output from all 47 species
Zm00001e037022_P001	Zm00001e037022	TOM endomembrane trafficking associated protein	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0005047	signal recognition particle binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005672	transcription factor TFIIA complex	IEP	HCCA
CC	GO:0005785	signal recognition particle receptor complex	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0016409	palmitoyltransferase activity	IEP	HCCA
BP	GO:0017003	protein-heme linkage	IEP	HCCA
BP	GO:0017004	cytochrome complex assembly	IEP	HCCA
BP	GO:0017006	protein-tetrapyrrole linkage	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0045047	protein targeting to ER	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002014	VHS_dom	3	121
IPR004152	GAT_dom	195	269

External Links

No external refs found!

Solyc08g068370.3.1 (Solyc08g068370)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation