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  5. Solyc08g068000.3.1

Solyc08g068000.3.1 (AtLKT1, KC1, KAT3,...)


Aliases : AtLKT1, KC1, KAT3, ATKC1, Solyc08g068000

Description : voltage-gated potassium cation channel (AKT/SKOR/GORK)


Gene families : OG0000357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000357_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g068000.3.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Ala_g35342 SKOR voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species
Ceric.05G062800.1 ATAKT1, AKT1,... voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.03 OrthoFinder output from all 47 species
Ceric.05G104000.1 ATAKT1, AKT1,... voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.06 OrthoFinder output from all 47 species
Dde_g11194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035748001 AtLKT1, KC1, KAT3, ATKC1 Solute transport.channels.VIC superfamily.voltage-gated... 0.04 OrthoFinder output from all 47 species
Gb_06791 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.02 OrthoFinder output from all 47 species
Ppi_g16575 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species
Sam_g33570 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species
Sam_g36087 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR021789 KHA_dom 574 642
IPR000595 cNMP-bd_dom 420 503
IPR005821 Ion_trans_dom 53 325
No external refs found!