Heatmap: Cluster_109 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
Solyc00g076250.1.1 (Solyc00g076250)
- - 2.65 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.57 - - - 0.16 4.75 - - - -
-3.67 -6.06 -1.79 -4.77 -4.11 - -5.4 -8.18 -8.1 - - - -4.89 1.09 -2.87 -4.44 -4.35 -6.03 -3.24 -4.41 -2.71 -4.54 -3.91 -3.2 -4.25 -3.63 -6.26 -3.34 -4.67 -5.1 -5.99 -5.97 -3.54 - -2.19 -5.33 -3.65 -4.22 - - - -4.09 -3.54 -3.57 - -2.26 -4.61 3.25 -0.02 -2.7 -4.24 - -0.86 5.39 - - - -3.42
-3.73 - -1.2 -4.34 -6.09 - - - - - - - -2.94 0.66 -0.76 -1.31 -2.87 -7.85 -3.54 - -2.97 - -2.78 -2.94 -5.1 - - -2.19 -2.51 -2.78 -3.57 -1.97 -1.71 - - - - - - -4.67 - -5.31 - - - -3.22 - 3.73 0.58 -2.59 - -4.99 -0.24 5.2 -3.09 -3.36 -5.67 -
Solyc01g060183.1.1 (Solyc01g060183)
-3.03 -3.13 -0.68 0.95 2.44 - 0.59 -2.34 -2.9 -4.96 -4.17 -6.73 -0.22 -1.3 -0.15 -0.33 0.24 -2.0 -1.19 -3.96 0.79 0.98 0.25 0.98 1.19 -0.66 -0.25 0.95 2.02 0.87 0.85 1.07 1.58 -0.56 -1.26 -2.23 -1.53 -3.57 - -0.79 - -1.49 - -1.04 -1.52 - -2.31 -0.56 1.57 0.06 1.74 -1.65 -1.23 0.4 0.67 0.32 -0.55 -1.86
Solyc01g088105.1.1 (Solyc01g088105)
- - - 3.99 - - - - - - - - 0.24 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.01 - - - - -4.15 5.28 - - - -
Solyc01g090630.4.1 (Solyc01g090630)
-4.21 -5.13 -4.73 -0.15 2.57 -4.16 1.76 -5.22 -4.34 -4.0 -3.73 -3.46 -4.54 -5.86 -9.16 -6.87 -4.51 -4.86 -2.93 -5.02 -3.8 - -3.7 -3.91 -3.93 -3.54 -4.46 -4.0 -3.3 -3.59 -2.82 -3.63 -3.76 -4.27 -2.29 -4.56 -3.33 -1.7 -2.75 -1.61 -2.49 -2.17 -2.18 -3.03 -2.33 -1.94 -7.74 3.34 -1.17 -2.42 -0.73 -6.29 -4.98 4.41 1.03 -3.67 -4.93 3.15
Solyc01g094130.2.1 (CYP704A2)
- -4.73 -4.52 -1.58 -0.43 - -4.07 - -7.64 - - -5.28 - - -5.36 -5.56 -4.24 -5.38 - -5.05 -3.38 -4.21 -4.62 -3.75 -3.77 -2.74 -6.18 -4.76 -4.73 -4.03 -2.91 -2.45 -1.71 - -1.77 -4.05 1.37 1.46 0.89 0.31 0.04 0.64 1.84 1.22 -0.36 -0.07 -6.63 3.19 -0.57 -3.16 -2.54 - -3.77 4.01 -0.42 -0.6 -4.96 3.11
- - - 3.76 - - - - - - - - 1.27 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.45 - - - - - 2.96 2.42 - - - -2.79 4.77 - - - -
Solyc01g109895.1.1 (Solyc01g109895)
-9.84 -9.86 -3.48 -6.2 -5.54 - - - -12.55 -10.86 -11.8 - -3.65 -4.67 -4.03 -4.3 -6.88 -3.25 -4.36 -6.83 -2.98 - -6.54 -3.91 -4.64 -3.61 -7.68 -2.18 -1.56 -2.24 -3.25 -3.03 -2.89 -5.81 -2.83 -3.79 - -9.15 - - - -4.85 - - -3.18 1.08 - 3.95 -1.3 - - -10.12 -6.41 3.85 2.54 -0.65 -5.98 4.06
Solyc02g087340.3.1 (Solyc02g087340)
0.49 0.36 -0.5 -1.32 -2.81 -0.09 -1.29 -0.14 0.32 0.69 0.7 0.68 -0.88 -0.79 -0.69 -0.58 -0.25 0.55 -0.73 -0.37 0.18 0.53 -0.23 0.18 0.37 1.76 1.6 -0.11 0.4 0.12 -0.07 0.2 0.23 -3.91 -0.33 -1.35 -0.64 -1.12 -1.16 -0.41 -1.29 -1.04 -0.38 -0.49 -1.64 -1.36 -1.09 -0.32 -0.42 -1.21 -1.69 0.02 -0.41 3.0 -0.47 -1.54 -2.63 -1.53
-4.08 -4.99 -2.04 - -6.74 - - - - - - - -4.04 -0.59 -4.5 -4.56 -6.63 -6.84 - -6.44 -3.94 - -5.65 -4.36 -4.44 -4.91 -6.92 -4.54 -3.27 -4.02 -3.3 -3.6 -3.34 - -3.53 -5.42 - -5.62 -4.67 -5.12 -2.35 -5.07 -5.53 - -3.64 -3.14 -5.59 3.99 -0.84 -3.64 -3.95 -6.59 -0.65 5.25 -3.98 - -6.45 -4.91
Solyc03g071855.1.1 (Solyc03g071855)
- - 0.99 - - - - - - - - - - 1.17 0.7 0.56 3.01 -4.51 - - -3.46 0.36 -2.05 -0.15 -1.5 -3.04 -3.93 -1.5 - - - -0.84 -3.23 - - -1.82 - -0.98 -0.03 0.01 0.97 -0.54 - 0.01 1.69 - -1.84 2.93 -0.97 -1.29 -0.87 - -1.51 4.23 -2.2 - - -2.59
- -4.98 -2.46 - -3.63 - - -8.54 - - - - -4.63 -1.97 -3.43 -3.39 -3.28 - - -5.59 -5.64 -5.16 -2.74 -4.25 -3.61 -4.1 -4.92 -3.66 -5.49 - -2.84 -5.26 -3.37 - -2.42 -4.33 - - - -3.12 - -6.18 - - - -4.07 -4.69 3.66 -1.79 -2.28 -4.39 -5.47 -1.12 5.38 -1.7 -4.79 -5.15 -5.1
Solyc03g098030.3.1 (Solyc03g098030)
-6.43 - -5.86 -2.71 -2.67 - -1.53 -8.62 - - - - -3.84 -5.02 -7.71 -8.12 -4.25 -4.01 -2.98 -2.48 0.89 - 1.67 1.7 1.61 -2.94 - 1.16 0.62 1.42 1.07 1.17 1.36 -0.65 0.84 -0.26 - - - - - -5.89 - - -4.58 -6.88 -4.64 3.82 -3.45 - -6.77 -2.75 -3.09 3.61 -2.15 - - 0.72
Solyc03g123650.3.1 (Solyc03g123650)
1.53 1.09 0.5 1.2 1.7 - -0.23 - -5.24 - -6.78 - 0.35 -1.52 -2.29 -2.42 -2.38 -1.37 - -0.23 -3.09 - -2.6 -3.18 -3.32 -0.55 -3.32 -1.51 -2.73 -0.43 0.13 0.37 0.19 1.39 1.85 0.48 -0.89 -1.26 - -0.31 - -0.2 -0.69 - 0.11 0.93 -5.69 1.5 -0.56 -2.73 0.3 -1.89 -3.24 2.92 -2.64 1.23 0.87 2.2
Solyc04g015120.3.1 (Solyc04g015120)
-4.58 -4.37 -5.23 -1.22 -4.87 -6.18 -3.86 -5.29 -5.36 -4.22 -4.34 -4.63 -0.71 -3.44 -3.47 -4.45 -0.48 -1.74 -4.11 -7.15 -6.54 - - -6.5 -5.1 -4.19 -6.45 -6.22 -4.25 -6.77 -8.13 -5.26 -5.17 -3.0 0.01 -1.79 -2.89 -2.09 -1.58 -1.46 -2.8 -2.45 -0.84 -1.18 -3.18 -4.13 -7.5 3.58 3.52 -5.72 -6.98 -7.31 -2.96 4.13 -1.92 -4.32 -5.51 3.26
0.46 0.16 -0.1 -1.1 -3.22 -8.77 -3.54 -9.26 -10.1 -9.41 -9.73 -11.62 -0.13 -0.39 -0.84 -0.65 0.69 -0.52 0.23 -0.3 0.78 -0.14 0.24 0.55 0.57 -0.25 -0.29 0.8 0.87 0.87 0.71 0.98 1.13 -1.47 1.11 -0.47 -0.74 -0.92 -0.88 -0.81 -0.79 -0.77 -0.76 -0.69 -0.26 0.09 -3.2 0.59 1.61 0.2 0.7 -0.81 -0.61 1.91 0.76 0.27 -0.42 0.37
Solyc05g018563.1.1 (Solyc05g018563)
- - - - - - - - - - - - - - 1.02 - - - - - - - - - - - - - - - - - - - - 3.68 3.44 - - - - 0.61 - - - - - - 4.24 - - - -2.08 3.54 - - - -
- - -2.1 1.84 - - - - - - - - -0.35 -1.31 -1.04 0.16 -2.02 -3.68 - - - - -0.95 -2.94 -2.46 -1.38 -1.64 -3.4 -1.46 -1.61 -3.39 - - - - - -1.06 - - - - -3.74 - 0.02 - -0.25 0.69 3.57 -0.01 - - - 0.11 4.4 -2.21 -2.59 - 3.19
- - -1.78 3.75 - - - - - - - - -2.37 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -4.12 - - - - - 3.15 0.37 - - - -0.94 5.01 0.05 - - -
Solyc07g005630.3.1 (Solyc07g005630)
- - - - - - - - - - - - - -6.68 -5.85 - - - - - - -0.09 - -6.78 - - -3.43 - - - - - - - - - -2.43 -2.19 -2.39 -0.71 -0.39 -2.01 -1.36 - - - - 2.5 -2.6 - - - 0.61 5.49 - - - 1.07
1.21 1.06 0.54 -0.43 -3.98 -7.73 -5.3 -4.26 -5.18 -6.63 -6.52 -7.03 0.34 -0.71 -2.42 -1.95 -0.16 -2.3 0.93 0.55 0.2 -0.74 0.02 0.0 -0.41 -0.13 -0.89 0.47 -0.16 0.18 0.51 0.34 0.05 -5.44 -0.26 -1.65 1.06 0.58 0.83 0.74 0.07 0.07 0.9 0.67 -0.45 -0.94 -1.8 -1.53 0.32 0.71 1.02 1.14 0.22 2.59 -1.19 -2.91 -0.48 -3.66
Solyc07g007480.2.1 (Solyc07g007480)
-0.11 - - 1.83 - - - - -2.1 -1.27 -3.12 -0.18 - - - - - - 3.24 - - - -1.17 - -2.18 0.0 - -0.18 -0.47 -0.53 - 0.09 -1.86 - - - - - - - - -3.2 - - - 1.5 - 0.04 0.5 -1.36 0.41 -0.67 0.46 4.17 1.06 - 2.98 -
Solyc07g007490.2.1 (Solyc07g007490)
-0.24 - -0.6 1.46 -1.24 - - -3.3 -1.35 -1.97 -2.66 -2.65 -3.14 -3.87 - - -0.46 - 2.23 0.98 -0.22 - -1.38 -1.15 0.36 -1.15 -2.5 -1.03 0.27 0.63 0.46 0.18 0.57 - -0.62 - - - - - - -1.82 - 0.8 - - -3.22 0.43 0.97 0.16 -0.41 0.84 0.91 3.88 1.0 - 2.45 -
- - - -7.1 - - - -10.04 - - - - - - - - - -8.53 - - - -1.71 - -8.48 -8.11 -1.95 -2.5 - -7.02 - - -8.92 -9.36 -5.25 -4.39 -3.49 - -4.28 - -5.66 -4.01 -4.15 -4.99 -3.95 -2.84 - - 2.4 0.49 - - - -0.89 5.63 - - - -
Solyc07g026893.1.1 (Solyc07g026893)
- - -13.5 4.11 - - - - - - - - - - - - - - - - - 3.49 - - - - - - - - - - - - - - - - - - - - - - - 1.96 - - 3.1 - - - - 4.09 - - - -
-2.89 -1.43 -4.73 -2.29 -0.59 - -5.65 - - - - - -2.9 -4.86 -6.73 -8.03 -2.43 -1.37 -2.72 -1.77 -4.65 -1.3 -2.67 -2.87 -4.12 - -5.06 -2.56 - -5.78 -3.09 -5.0 -4.06 - -1.86 -2.86 -2.05 1.1 -0.67 -0.4 1.71 0.27 -0.48 -1.95 0.33 -0.32 -2.92 3.41 0.97 - - -2.34 -1.07 3.85 - - - 3.87
Solyc08g065380.3.1 (Solyc08g065380)
0.24 -1.12 -2.48 1.33 -1.0 - - - - - - - -5.66 -5.47 - - -1.1 -0.8 - 0.84 - - - -5.17 - - - -4.19 -3.71 -4.14 - -6.32 -2.76 - -2.7 -3.54 - - - - - - - - - 0.66 -4.44 3.25 1.8 - -0.1 -4.72 -1.29 4.22 2.96 -1.74 0.19 2.54
Solyc08g067300.1.1 (Solyc08g067300)
-2.63 -0.99 -0.42 -0.47 -6.09 - - - - - - - -0.25 -0.89 -3.03 -2.28 -0.65 -2.98 -0.5 -1.98 0.56 -0.03 -0.59 -0.58 -0.79 -3.47 0.62 -0.05 0.11 0.18 0.16 0.36 -0.28 0.36 -0.47 -2.44 1.36 0.25 1.09 -1.09 -1.44 -0.14 0.89 1.12 -1.94 -1.19 -3.52 2.53 0.6 0.48 2.85 -1.86 -1.9 2.69 0.85 -1.51 -2.97 -2.29
-1.09 - -1.19 3.03 0.75 - -0.66 -6.39 -6.52 - - - -0.5 -0.87 -2.77 -2.09 1.54 -3.62 - -2.18 -0.27 - -3.04 -2.33 -4.31 - - -0.59 -0.39 0.26 -2.41 -1.65 -2.46 - -1.81 - -2.1 - - -1.51 - -2.11 - -0.97 - -1.8 - 3.89 -0.02 - -4.15 -2.96 -2.34 3.76 1.65 0.87 -2.12 -1.57
Solyc09g005410.3.1 (Solyc09g005410)
- - - 0.81 - - - - - - - - -0.95 -3.95 -3.76 -5.15 - -4.92 - - - - - - - - - - - - - -4.55 - - - - - - - - - -6.31 - - - -1.69 - 4.93 -3.17 - -3.15 - -4.86 4.53 0.21 -2.26 - -
- - - -3.26 -6.05 - - - -9.32 - - - -5.05 -8.59 - - -6.95 -8.63 - - - - - -8.87 -8.23 - - - - - - -7.13 -6.91 - -4.77 - - - - - - - - - - -0.82 - 3.91 -4.69 - - - -8.97 3.66 3.13 0.15 -0.98 4.26
- - - 2.36 - - - - - - - - - - - - - - - - - - - - - - - - - - 0.34 -0.74 - - 2.38 3.61 - - - - - 0.56 - - 2.6 - - - 3.59 - - - -1.26 3.77 - - - -
2.6 1.52 1.78 -0.67 - - - - - - - - 2.08 -4.33 -4.12 -6.28 -1.23 -0.93 -0.73 -0.83 -1.23 - -3.16 -2.18 -2.59 -2.93 -3.26 -0.51 0.18 0.09 -1.28 -2.8 -3.55 - -2.8 -0.1 - -2.88 - - -0.86 -1.56 -0.75 - -0.65 -3.63 -5.83 1.42 3.06 -1.05 2.63 - -4.8 2.66 1.86 -1.91 0.1 0.51
Solyc09g091630.1.1 (Solyc09g091630)
- - - 4.08 - - 2.29 - - - - - 1.36 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.16 - 0.29 2.01 - - - 0.16 4.27 - - - 2.53
Solyc09g098380.3.1 (Solyc09g098380)
-1.45 - -4.41 -1.1 -0.15 - 2.56 - - - - - -4.66 -5.73 -3.47 -1.89 -2.15 -0.2 - - - - - -4.26 -5.3 - - - -1.58 - -4.62 - -3.35 - - -2.88 - - - - - - - - - - -0.37 2.6 -1.27 - -4.24 -3.69 -0.63 5.33 - - - -
Solyc11g006635.1.1 (Solyc11g006635)
- - - -0.1 0.89 - - -2.49 - - - - - -1.06 - - - -1.77 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.44 3.65 - - - -0.95 4.77 - 0.64 - 2.79
-0.38 -0.48 -0.65 -0.75 -3.38 -3.96 -1.99 -3.27 -3.15 -3.04 -3.03 -2.7 -0.52 -0.19 -0.51 -0.66 -0.05 -0.31 -0.62 -0.39 0.38 0.35 0.49 0.38 0.26 1.64 2.09 0.46 0.12 0.46 0.68 0.51 0.27 -0.63 -0.54 -0.93 -0.31 -0.39 -0.39 -0.08 -0.47 -0.54 -0.2 -0.41 -0.4 -0.29 -0.92 -0.24 -0.5 -0.21 0.11 -0.56 -0.67 2.96 -0.34 -0.2 0.05 -0.54
Solyc11g065070.2.1 (Solyc11g065070)
0.46 -0.21 1.01 0.83 -4.71 -5.96 -6.09 -5.24 -5.73 -7.5 -7.15 -8.09 1.08 -0.44 -0.11 0.17 1.03 1.5 0.44 -1.29 -0.65 1.64 -0.5 -0.28 -0.36 -0.69 0.04 -0.89 -1.32 -0.96 -0.8 -0.95 -1.09 -3.0 -1.02 -1.66 -0.49 -0.9 -0.07 -0.11 -0.58 -0.43 -0.44 -0.64 -0.91 0.9 0.21 0.73 -0.48 1.13 0.34 -0.78 0.85 2.68 1.22 -0.68 -1.9 0.4
Solyc11g069900.3.1 (Solyc11g069900)
- - - - - - - - - - - - -5.75 - - - - - - - - - - - - - - - - - - - - - - -4.18 - - - - - -7.46 - - - 0.19 - 2.95 -5.94 - - - - 5.54 - - - 1.23
- - -4.1 3.86 - - - - -5.45 - - - -2.87 -2.51 - -2.43 - -4.62 - - - - - - - - - - - - - - - - -0.21 - - - - - - -5.87 - - - - - 3.85 2.49 - - - 0.77 4.18 -1.36 - - 0.69

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.