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  5. Solyc08g067920.3.1

Solyc08g067920.3.1 (Solyc08g067920)


Aliases : Solyc08g067920

Description : no hits & (original description: none)


Gene families : OG0002205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g067920.3.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00182900 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00142p00066900 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT5G04670 No alias Enhancer of polycomb-like transcription factor protein 0.05 OrthoFinder output from all 47 species
Adi_g011978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07371 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g10926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g10927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13746.t1 Aspi01Gene13746 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49845.t1 Aspi01Gene49845 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g59047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G056900.1 Ceric.33G056900 not classified & original description: pacid=50606463... 0.09 OrthoFinder output from all 47 species
Dcu_g04155 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g40025 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g04065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035731001 No alias No description available 0.11 OrthoFinder output from all 47 species
Gb_25776 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g08430.1 LOC_Os01g08430 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g10458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12408 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10428588g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_37588g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp8g09190.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g21773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02509 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25804 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g11849 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g49147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02423 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21971 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g26516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025916_P001 Zm00001e025916 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR019542 Enhancer_polycomb-like_N 1303 1394
No external refs found!