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  5. Solyc08g067880.4.1

Solyc08g067880.4.1 (Solyc08g067880)


Aliases : Solyc08g067880

Description : no hits & (original description: none)


Gene families : OG0001835 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001835_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g067880.4.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT2G25670 No alias BEST Arabidopsis thaliana protein match is: copper ion... 0.07 OrthoFinder output from all 47 species
AT4G32610 No alias copper ion binding 0.04 OrthoFinder output from all 47 species
Ceric.05G058400.1 Ceric.05G058400 not classified & original description: pacid=50577638... 0.04 OrthoFinder output from all 47 species
Ore_g08842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g45058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo444781 No alias No description available 0.04 OrthoFinder output from all 47 species
Spa_g07750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025914_P001 Zm00001e025914 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA

No InterPro domains available for this sequence

No external refs found!