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  5. Solyc08g067870.2.1

Solyc08g067870.2.1 (emb2410, Solyc08g067870)


Aliases : emb2410, Solyc08g067870

Description : no description available(sp|f4isl7|ti236_arath : 953.0)


Gene families : OG0003871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g067870.2.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00090900 emb2410,... No description available 0.04 OrthoFinder output from all 47 species
Aev_g04899 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Ala_g14706 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.05 OrthoFinder output from all 47 species
Ceric.14G073200.1 emb2410, Ceric.14G073200 component *(Tic236) of inner envelope TIC translocation... 0.05 OrthoFinder output from all 47 species
Ehy_g23741 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Len_g29844 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Lfl_g38744 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
MA_10434122g0010 emb2410 component Tic236 of inner envelope TIC translocation system 0.04 OrthoFinder output from all 47 species
MA_196707g0010 emb2410 no description available(sp|f4isl7|ti236_arath : 243.0) 0.04 OrthoFinder output from all 47 species
MA_216695g0010 emb2410 no description available(sp|f4isl7|ti236_arath : 187.0) 0.03 OrthoFinder output from all 47 species
MA_59214g0010 emb2410 no description available(sp|f4isl7|ti236_arath : 202.0) 0.03 OrthoFinder output from all 47 species
Msp_g23061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38227 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Pir_g02009 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Pnu_g12183 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Smo439584 emb2410 No description available 0.02 OrthoFinder output from all 47 species
Spa_g08438 emb2410 component *(Tic236) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!