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  5. Solyc08g067770.3.1

Solyc08g067770.3.1 (Solyc08g067770)


Aliases : Solyc08g067770

Description : RING-H2-class E3 ligase


Gene families : OG0001028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g067770.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g022001 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21445 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g008139 No alias E3 ubiquitin ligase *(DRR1) & original description: CDS=62-1507 0.04 OrthoFinder output from all 47 species
Ceric.20G075100.1 Ceric.20G075100 E3 ubiquitin ligase *(DRR1) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.36G015300.1 Ceric.36G015300 E3 ubiquitin ligase *(DRR1) & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.16 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g08149 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06914 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014737001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_16413 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_28554 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os05g08610.1 LOC_Os05g08610 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Lfl_g05520 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.02 OrthoFinder output from all 47 species
MA_43079g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Pir_g06087 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18007 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14414 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.02 OrthoFinder output from all 47 species
Smo76977 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Zm00001e016078_P001 Zm00001e016078 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e016704_P001 Zm00001e016704 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 355 397
No external refs found!