Solyc08g066590.3.1 (Solyc08g066590)


Aliases : Solyc08g066590

Description : no hits & (original description: none)


Gene families : OG0000676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g066590.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00170390 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00171p00044550 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g19245 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g27649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g27787 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g21266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g21377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g59886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59477.t1 Aspi01Gene59477 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0478.g073053 No alias not classified & original description: CDS=1-1164 0.04 OrthoFinder output from all 47 species
Azfi_s0478.g073054 No alias not classified & original description: CDS=1-1137 0.04 OrthoFinder output from all 47 species
Ceric.09G054400.1 Ceric.09G054400 not classified & original description: pacid=50588133... 0.05 OrthoFinder output from all 47 species
Ceric.10G068800.1 Ceric.10G068800 not classified & original description: pacid=50613531... 0.05 OrthoFinder output from all 47 species
Ceric.26G032000.1 Ceric.26G032000 not classified & original description: pacid=50599460... 0.07 OrthoFinder output from all 47 species
Ceric.26G032300.1 Ceric.26G032300 not classified & original description: pacid=50600130... 0.07 OrthoFinder output from all 47 species
Dcu_g28701 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g11428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005843001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00316 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_38738 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73700.1 LOC_Os01g73700 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g73710.1 LOC_Os01g73710 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g73720.1 LOC_Os01g73720 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73730.1 LOC_Os01g73730 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g01680.1 LOC_Os05g01680 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g47940.1 LOC_Os05g47940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g05360.1 LOC_Os11g05360 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g35928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17959 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10430750g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_63925g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
MA_6771381g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_74876g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7605738g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8955g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_957739g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g11810.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g23480.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pnu_g00722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009646 Root_cap 406 462
No external refs found!