Solyc08g066240.3.1 (emb1075, Solyc08g066240)

Aliases : emb1075, Solyc08g066240

Description : Histidine decarboxylase OS=Solanum lycopersicum (sp|p54772|dchs_sollc : 764.0)

Gene families : OG0002528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002528_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g066240.3.1
Cluster	HCCA: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
Als_g22217	emb1075	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g17891	emb1075	serine decarboxylase & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0201.g057604	emb1075	not classified & original description: CDS=1-1401	0.04	OrthoFinder output from all 47 species
Ceric.05G033900.1	emb1075, Ceric.05G033900	serine decarboxylase & original description:...	0.01	OrthoFinder output from all 47 species
Dde_g49447	emb1075	serine decarboxylase & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os02g33710.1	emb1075, LOC_Os02g33710	serine decarboxylase	0.02	OrthoFinder output from all 47 species
Len_g15529	emb1075	serine decarboxylase & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g32276	emb1075	serine decarboxylase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g06674	emb1075	serine decarboxylase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc07g041260.3.1	emb1075, Solyc07g041260	Histidine decarboxylase OS=Solanum lycopersicum...	0.01	OrthoFinder output from all 47 species
Solyc08g006740.3.1	emb1075, Solyc08g006740	Histidine decarboxylase OS=Solanum lycopersicum...	0.05	OrthoFinder output from all 47 species
Solyc08g006750.4.1	emb1075, Solyc08g006750	Histidine decarboxylase OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Solyc08g066220.4.1	emb1075, Solyc08g066220	Histidine decarboxylase OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Solyc08g068665.1.1	emb1075, Solyc08g068665	Histidine decarboxylase OS=Solanum lycopersicum...	0.04	OrthoFinder output from all 47 species
Spa_g56020	emb1075	serine decarboxylase & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	IEA	Interproscan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	HCCA
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0015074	DNA integration	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	75	364

External Links

No external refs found!

Solyc08g066240.3.1 (emb1075, Solyc08g066240)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation