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  5. Solyc08g065680.3.1

Solyc08g065680.3.1 (Solyc08g065680)


Aliases : Solyc08g065680

Description : Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica (sp|q7xw27|p2c38_orysj : 149.0)


Gene families : OG0000149 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g065680.3.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT5G26010 No alias Protein phosphatase 2C family protein 0.04 OrthoFinder output from all 47 species
Adi_g013876 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025708 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02439 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23217 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46767 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13045 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G064800.1 Ceric.19G064800 clade E phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G023100.1 Ceric.34G023100 clade E phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Cre03.g170250 No alias Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g11738 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20628 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13223 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24875 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030261001 No alias Protein modification.dephosphorylation.serine/threonine... 0.04 OrthoFinder output from all 47 species
LOC_Os02g13100.1 LOC_Os02g13100 clade E phosphatase 0.03 OrthoFinder output from all 47 species
Len_g22736 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47859 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06194 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64468 No alias clade E phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11327 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11328 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11879 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 67 137
IPR001932 PPM-type_phosphatase-like_dom 4 66
No external refs found!