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  5. Solyc08g065370.1.1

Solyc08g065370.1.1 (PSBD, Solyc08g065370)


Aliases : PSBD, Solyc08g065370

Description : Photosystem II D2 protein OS=Tupiella akineta (sp|q3zj46|psbd_tupak : 131.0)


Gene families : OG0001107 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g065370.1.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Aev_g33560 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.01 OrthoFinder output from all 47 species
Cba_g05717 PSBA component *(PsbA/D1) of PS-II reaction center complex &... 0.08 OrthoFinder output from all 47 species
Ceric.33G023400.1 PSBD, Ceric.33G023400 not classified & original description: pacid=50607236... 0.03 OrthoFinder output from all 47 species
Gb_23102 PSBA no description available(sp|q85bh5|psba_antag : 432.0) 0.02 OrthoFinder output from all 47 species
LOC_Os04g16872.1 PSBD, LOC_Os04g16872 component PsbD/D2 of PS-II reaction center complex 0.03 OrthoFinder output from all 47 species
Ore_g12399 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e015953_P001 PSBD, Zm00001e015953 component PsbD/D2 of PS-II reaction center complex 0.03 OrthoFinder output from all 47 species
Zm00001e042043_P001 PSBD, Zm00001e042043 Photosystem II D2 protein OS=Angiopteris evecta... 0.02 OrthoFinder output from all 47 species
Zm00001e042109_P001 PSBD, Zm00001e042109 Photosystem II D2 protein OS=Angiopteris evecta... 0.02 OrthoFinder output from all 47 species
Zm00001e042158_P001 PSBD, Zm00001e042158 Photosystem II D2 protein OS=Angiopteris evecta... 0.02 OrthoFinder output from all 47 species
Zm00001e042173_P001 PSBD, Zm00001e042173 Photosystem II D2 protein OS=Angiopteris evecta... 0.02 OrthoFinder output from all 47 species
Zm00001e042176_P001 PSBA, Zm00001e042176 component PsbA/D1 of PS-II reaction center complex 0.03 OrthoFinder output from all 47 species
Zm00001e042427_P001 PSBD, Zm00001e042427 component PsbD/D2 of PS-II reaction center complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 16 82
No external refs found!