Heatmap: Cluster_89 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
Solyc00g500039.1.1 (Solyc00g500039)
-1.34 -0.77 -1.75 1.55 2.52 -8.09 1.95 -6.02 -7.81 -9.82 -10.71 -9.36 -0.96 -0.24 -0.28 -0.25 0.07 3.24 1.15 -1.24 -1.09 -5.13 -1.55 -0.81 -0.48 -1.24 0.86 -0.41 0.65 -1.68 -0.76 -0.46 0.31 -0.53 -1.42 -1.98 -0.46 -0.33 -0.82 -0.16 0.55 0.56 -1.06 -1.53 -0.25 1.4 1.76 -3.41 -1.67 -1.73 -3.78 -0.84 0.09 -3.61 -4.74 -4.92 -5.65 -0.14
Solyc00g500044.1.1 (Solyc00g500044)
-1.34 -0.77 -1.75 1.55 2.52 -8.09 1.95 -6.02 -7.81 -9.82 -10.71 -9.36 -0.96 -0.24 -0.28 -0.25 0.07 3.24 1.15 -1.24 -1.09 -5.13 -1.55 -0.81 -0.48 -1.24 0.86 -0.41 0.65 -1.68 -0.76 -0.46 0.31 -0.53 -1.42 -1.98 -0.46 -0.33 -0.82 -0.16 0.55 0.56 -1.06 -1.53 -0.25 1.4 1.76 -3.41 -1.67 -1.73 -3.78 -0.84 0.09 -3.61 -4.74 -4.92 -5.65 -0.14
Solyc00g500083.1.1 (Solyc00g500083)
-1.34 -0.77 -1.75 1.55 2.52 -8.09 1.95 -6.02 -7.81 -9.82 -10.71 -9.36 -0.96 -0.24 -0.28 -0.25 0.07 3.24 1.15 -1.24 -1.09 -5.13 -1.55 -0.81 -0.48 -1.24 0.86 -0.41 0.65 -1.68 -0.76 -0.46 0.31 -0.53 -1.42 -1.98 -0.46 -0.33 -0.82 -0.16 0.55 0.56 -1.06 -1.53 -0.25 1.4 1.76 -3.41 -1.67 -1.73 -3.78 -0.84 0.09 -3.61 -4.74 -4.92 -5.65 -0.14
1.47 1.96 0.02 2.73 -0.94 -8.78 -2.08 -5.89 -7.81 -7.66 -7.73 -7.95 1.36 -1.96 -2.06 -1.93 -3.32 1.45 3.29 1.82 -1.79 -4.26 -0.58 -0.85 -1.56 -0.38 -0.64 -1.19 -1.69 -1.81 -0.36 -0.68 -1.5 -2.79 -4.13 -3.59 -1.52 -1.82 -1.9 -0.84 -1.41 -1.37 -2.03 -2.86 -1.07 2.26 1.06 -0.29 1.15 -0.91 -7.35 -0.13 1.16 -2.06 -5.1 -5.15 -5.6 -5.41
Solyc00g500301.1.1 (Solyc00g500301)
-1.34 -0.77 -1.75 1.55 2.52 -8.09 1.95 -6.02 -7.81 -9.82 -10.71 -9.36 -0.96 -0.24 -0.28 -0.25 0.07 3.24 1.15 -1.24 -1.09 -5.13 -1.55 -0.81 -0.48 -1.24 0.86 -0.41 0.65 -1.68 -0.76 -0.46 0.31 -0.53 -1.42 -1.98 -0.46 -0.33 -0.82 -0.16 0.55 0.56 -1.06 -1.53 -0.25 1.4 1.76 -3.41 -1.67 -1.73 -3.78 -0.84 0.09 -3.61 -4.74 -4.92 -5.65 -0.14
Solyc00g500325.1.1 (Solyc00g500325)
-1.34 -0.77 -1.75 1.55 2.52 -8.09 1.95 -6.02 -7.81 -9.82 -10.71 -9.36 -0.96 -0.24 -0.28 -0.25 0.07 3.24 1.15 -1.24 -1.09 -5.13 -1.55 -0.81 -0.48 -1.24 0.86 -0.41 0.65 -1.68 -0.76 -0.46 0.31 -0.53 -1.42 -1.98 -0.46 -0.33 -0.82 -0.16 0.55 0.56 -1.06 -1.53 -0.25 1.4 1.76 -3.41 -1.67 -1.73 -3.78 -0.84 0.09 -3.61 -4.74 -4.92 -5.65 -0.14
-2.5 -2.46 -3.82 4.65 2.79 - -0.59 -4.52 - - - - 2.54 -3.49 -3.6 - - - - - -1.98 - - -2.26 -4.3 -2.11 0.63 -3.24 - - -3.12 -3.29 -1.97 - - - -0.96 -1.85 1.14 -1.24 0.14 -1.12 -0.72 - - - - -2.0 2.79 -3.47 -2.45 - -2.65 -1.85 1.18 -2.12 - -
Solyc01g015185.1.1 (Solyc01g015185)
- - - 2.46 1.56 - - - - - - - - - - - - 3.38 - - 0.97 - - -0.76 - - - - - - 1.44 - -0.5 - 2.84 - - - 3.65 - - -1.77 - - - - - 1.7 2.89 - - - -2.62 - - 1.18 - -
Solyc01g017050.1.1 (Solyc01g017050)
-3.47 -2.8 -1.61 -2.75 -5.33 -7.96 -4.19 -7.51 -9.32 -9.82 -10.96 -9.99 -3.25 1.22 1.17 1.19 1.0 3.55 -3.04 -3.23 0.13 -3.71 -0.65 0.37 0.66 -0.57 1.86 0.96 1.92 -0.45 0.27 0.78 1.78 -0.01 -2.33 -2.8 -1.53 -1.26 -2.5 -1.2 -0.12 -0.09 -3.29 -4.08 -1.56 -0.91 2.71 -3.58 -2.52 -1.51 -2.3 -0.46 -1.53 -4.54 -2.81 -3.88 -4.36 -3.13
Solyc01g034075.1.1 (Solyc01g034075)
0.5 -1.82 -0.73 3.74 2.28 - 1.62 -4.36 -2.56 -3.62 -3.7 -3.33 0.58 -2.84 -2.64 -5.34 -1.49 -1.3 -0.35 -1.06 -0.32 -2.27 -1.08 -0.33 -1.55 -3.09 -0.95 -0.19 0.04 -0.15 0.3 1.06 -0.11 - -1.29 -2.63 0.6 -0.48 -0.91 -0.02 0.09 -0.6 0.72 - 0.04 -1.54 - -0.54 1.68 0.82 0.95 -2.14 -1.25 -1.21 -0.82 -1.9 0.3 -
Solyc02g004000.1.1 (Solyc02g004000)
-0.24 0.88 1.21 -0.13 0.22 -3.2 0.42 -2.29 -2.38 -2.24 -2.65 -1.73 -2.62 0.69 1.26 1.39 -0.3 2.45 2.66 0.54 -1.75 -1.99 -1.79 -1.18 -0.99 -1.5 0.85 -1.11 1.18 -2.39 -1.4 -0.96 -0.21 0.38 -1.65 -2.92 -0.83 -0.02 -1.76 -0.34 1.07 1.96 -2.1 -2.03 0.25 -0.04 -0.27 -2.19 -3.05 0.45 -2.16 -2.5 -2.31 -1.95 -0.59 -0.46 -1.68 -0.26
2.88 2.29 0.4 1.33 1.93 - 0.35 -6.32 - - - -5.03 1.91 - - -3.06 -2.65 -2.78 2.97 1.43 - - - -6.22 - -3.34 - -2.76 - - - - -4.23 - - - -0.36 -0.45 - 0.75 - -3.21 - - -0.28 1.35 -1.64 -0.39 3.27 1.49 - - -1.05 -1.1 - -0.81 -5.57 -
- -1.81 -2.53 4.37 2.3 -0.16 0.67 -0.42 -0.07 -0.65 0.01 -0.12 1.0 - - -1.17 -0.08 -2.12 - - -1.9 - - -3.63 - - - - -1.49 - -2.64 - -1.85 - 0.63 - - - - -0.59 - - - - - - - -0.14 1.95 - -2.36 - -1.68 0.64 1.72 1.16 2.47 -1.77
Solyc02g067400.3.1 (Solyc02g067400)
0.69 -0.48 -0.28 3.02 -1.87 - -1.51 -5.87 - - - - 3.21 - -3.35 -3.13 -1.95 -4.53 -1.39 -1.06 -1.93 0.52 -3.14 -2.63 -3.34 -0.23 0.58 -0.06 -2.56 - -3.24 -2.72 -1.9 -0.07 -0.81 -1.64 - - 0.13 0.81 - 0.19 - - 0.08 - -3.15 0.87 4.07 - - - -1.79 -0.81 0.08 0.31 -0.58 -
Solyc03g058490.1.1 (Solyc03g058490)
1.13 1.38 -0.44 3.01 1.66 - -1.91 -2.48 -3.46 -4.19 -4.64 -5.48 1.45 -2.23 -3.02 -2.68 -1.22 -1.85 1.52 0.23 -0.76 - -0.22 -0.67 -0.64 1.2 0.07 -0.71 -0.17 -1.54 -0.38 -0.08 -0.77 - -1.57 -1.11 -0.24 0.27 1.62 1.5 -1.19 -0.21 0.84 1.44 0.1 -0.82 - 0.4 1.44 -0.4 -0.76 -3.78 -1.73 -1.93 -2.55 - -3.87 -
Solyc04g008320.3.1 (Solyc04g008320)
2.36 - - - - - - - - - - - 1.09 - - 0.85 - 3.89 3.48 - - - - 0.27 - - - - - - - 1.49 - - - - - - - - - - - - - - - - 1.24 - 2.4 - 0.69 3.28 - - - -
- - - 2.78 -0.29 - - - - - - - 1.65 - - -2.81 -1.16 - - - -0.4 - -0.69 - -1.29 4.06 1.96 -0.66 -1.18 -0.61 -1.13 -1.5 -0.4 - - - 0.75 - 1.78 1.21 - -1.48 0.77 - 1.82 - -0.61 0.64 2.2 - - - 0.11 - - - - -
Solyc04g049530.1.1 (Solyc04g049530)
- - - - - - - - - - - - - - - - - 5.66 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.62 - - - 0.22 - - - - -
Solyc04g050300.1.1 (Solyc04g050300)
1.18 0.74 0.25 1.73 0.77 - -1.84 - - - - - 0.64 -3.54 -4.13 -2.61 -0.53 -2.92 0.22 0.18 -0.4 -4.12 -0.09 -0.23 -0.34 0.22 -0.19 -0.51 0.32 -0.83 -0.2 0.1 -0.3 -0.71 0.55 -1.84 1.13 0.49 0.82 0.8 -0.51 -0.16 2.32 1.53 0.76 2.41 - 0.22 0.88 -0.55 -1.08 -1.91 -0.36 -1.71 -2.87 -2.28 -4.12 -
Solyc04g082980.2.1 (Solyc04g082980)
0.47 0.63 0.19 1.14 -1.06 -5.04 -2.32 -4.35 -4.41 -3.52 -3.6 -3.61 0.57 1.08 0.78 0.78 0.42 1.16 -0.27 0.04 0.26 0.53 0.72 0.57 0.44 -0.64 -0.66 0.65 0.45 0.13 0.66 0.51 0.56 -3.78 -0.62 -1.77 -0.34 -0.48 -0.5 -0.23 -0.24 -0.59 -0.68 -1.09 -0.87 -1.05 -0.27 -0.09 0.44 1.35 1.2 -0.14 -1.1 -0.75 -0.21 -0.05 0.6 -1.93
Solyc05g023950.1.1 (Solyc05g023950)
- - - - - - - - - - - - - - - - - 4.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.71 - - - - 3.62 - - - -
Solyc05g150100.1.1 (Solyc05g150100)
- - - - - - - - 2.36 - - - - - - - - 2.65 - - - - - - - - - - - - - 1.07 3.21 - - - - - - - - -0.54 - - - 4.38 - - 3.65 - - - 0.11 - - - - -
Solyc06g033787.1.1 (Solyc06g033787)
0.01 -0.62 0.04 2.93 1.91 - -0.33 -3.53 -2.61 - - - 1.35 -2.83 -2.45 -3.27 0.22 -1.88 0.68 -0.19 0.26 0.5 0.03 -0.3 -0.27 -0.93 -1.77 0.44 0.94 0.8 0.28 0.22 -0.22 - 0.16 -0.54 -1.46 -2.48 -0.36 -0.26 0.63 -0.89 - -0.33 1.04 -1.89 -4.56 -2.11 1.94 2.0 1.26 -1.7 -0.86 -1.06 -2.56 - -1.11 -
Solyc06g048705.1.1 (Solyc06g048705)
1.22 1.21 -0.07 2.44 1.21 - 0.2 -4.61 -4.85 - - - 1.54 -2.6 -2.98 -2.53 0.51 -1.49 0.95 -0.86 0.58 0.51 0.05 -0.13 0.12 0.25 -0.9 1.08 0.96 0.54 0.44 0.52 0.12 - 0.06 -0.0 -0.42 -0.12 - -0.69 - -0.66 0.05 - 0.99 -0.95 - -0.44 1.72 1.15 0.84 -1.28 -0.79 -0.65 -2.2 -1.79 -4.17 -
Solyc06g074570.2.1 (Solyc06g074570)
-4.1 -3.9 -3.6 3.63 2.23 -8.48 2.06 -5.08 -6.4 -6.75 -6.5 -6.42 1.28 -1.5 -1.16 -0.98 -0.25 0.93 -2.72 -3.26 -1.14 -5.02 -0.02 0.01 -0.45 -1.91 -1.78 -0.3 0.44 -1.46 0.44 0.11 0.21 -2.91 -2.63 -1.7 0.91 0.67 0.65 0.91 1.06 0.98 -0.03 -0.2 0.39 -4.61 -1.24 -0.58 1.47 -3.13 -4.29 -5.01 -4.05 -1.67 -2.88 -2.92 -4.25 -1.51
Solyc07g008677.1.1 (Solyc07g008677)
- 1.42 - - 1.67 - - - - - - - 0.21 1.27 2.01 0.95 2.98 2.21 - - - - 1.99 - 0.03 - - - - - - 3.28 1.99 - - - - - - - - -0.35 - - - - - - 3.37 - - - -1.53 - - - - -
Solyc07g022890.1.1 (Solyc07g022890)
- - - - - - - - - - - - - 2.86 4.52 - - 4.8 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 2.63 1.55 -0.6 - - - - - - 1.63 - - - - -2.65 - - 0.06 - - - -2.19 2.84 1.72 - 0.33 - - -1.66 -1.83 - - - - - - 0.52 - - - - 0.86 2.67 2.99 1.56 2.81 -1.2 - -0.58 1.46 - - - - -
- - - - -1.03 - 0.92 - -29.48 -2.89 - -6.55 - - - - - - - - 0.79 - - -1.59 1.42 - - 4.14 4.62 1.19 -1.2 -0.33 2.03 - - - - - - - - -3.21 - - - - - - -1.1 - - - -5.8 - - -1.54 - -
Solyc08g075500.4.1 (Solyc08g075500)
2.16 2.45 0.86 0.09 0.4 -6.99 0.64 -6.25 -5.06 -4.0 -3.43 -3.11 -1.29 -2.17 -2.55 -2.54 -1.03 -0.42 3.58 2.61 -1.72 -1.7 -1.87 -1.93 -2.16 -1.2 -2.05 -1.81 -1.8 -2.07 -1.55 -1.64 -1.85 -3.85 -2.33 -3.67 -0.89 -0.8 -0.69 -0.85 -0.46 -0.88 -1.29 -1.69 -2.08 1.09 -0.56 1.52 -1.16 0.7 -0.88 -0.74 -0.21 -1.05 -0.85 -1.11 -0.84 0.37
Solyc09g056100.2.1 (Solyc09g056100)
1.9 1.92 0.35 1.4 0.81 - 1.24 -5.9 -5.81 -7.21 -7.53 -7.43 -1.19 -2.87 -2.27 -2.05 0.93 -2.13 3.48 2.17 -0.64 -3.52 -0.07 0.16 -0.15 0.32 0.0 0.1 0.95 -0.88 0.38 0.19 0.51 -3.74 -1.49 -1.5 -1.23 -2.87 -2.54 -0.38 -2.01 0.03 -1.77 -1.5 -1.76 -0.55 -1.73 0.6 -1.43 -0.84 -7.17 -4.31 -2.96 -2.79 -1.57 -1.75 -3.01 0.27
Solyc09g150138.1.1 (Solyc09g150138)
- - - 0.62 2.98 - - -1.93 - - - - - 1.08 2.11 -2.41 - 1.28 - - - - - -1.64 - - -0.44 - - - - - - - - 1.67 - 3.28 - - - -0.35 2.45 - 3.4 - -0.8 1.19 1.53 - - - -2.83 - - 1.39 - -
- -2.02 - 3.95 -0.51 - -1.27 -4.86 - - - - 2.24 -2.73 - -3.92 -0.7 -2.58 - -2.24 - - -1.15 -0.27 -0.67 1.1 -1.54 -0.62 -1.43 -0.47 0.54 -0.41 -1.39 - - - 1.05 - - 1.02 - -1.44 - - 1.02 -2.34 1.78 -0.61 3.5 -1.07 - -1.22 1.32 -1.46 -1.52 -2.05 - -
- - - 1.84 - - - - - - - - 2.17 - - - - - - - - - - - - 2.64 0.99 - - - - - - - - - - - - - - - - - - - 1.7 2.1 4.84 - - - -0.93 - - 2.32 - -
- - - 0.26 3.95 - 3.42 - - - - - 0.39 - - - - 1.41 - - - - - - - - 0.32 - - - - - - - - - 1.97 - - 1.84 - -3.04 - 2.7 2.11 - - - 2.64 - - - -0.52 - - - - -
Solyc11g030940.3.1 (Solyc11g030940)
0.38 0.36 -1.54 3.81 2.15 - 0.82 - - - - - -0.86 -2.08 - - 2.54 - - - 0.62 - -0.3 -0.15 0.1 1.54 -0.82 0.01 2.05 - 1.51 0.54 0.29 - - - - - - 1.43 - -3.86 - - - - -1.24 - 2.7 - - - -4.06 - - - - -
Solyc11g043180.1.1 (Solyc11g043180)
-0.75 - -2.12 3.85 3.23 - -0.02 - - - - - 2.4 -2.9 - -1.27 -1.88 - - -0.15 -2.21 - 0.11 -0.73 -3.33 - 1.23 - -0.9 - -0.58 -0.95 -2.96 - - - 0.01 -0.9 1.05 0.47 - -1.8 - - - -1.87 - -1.09 2.67 1.82 0.6 - -3.79 - 0.44 - -1.63 -
Solyc11g045440.1.1 (Solyc11g045440)
0.0 0.25 -1.05 3.15 1.68 -7.69 1.86 -4.9 -6.22 -6.9 -6.3 -5.98 -0.07 -1.65 -1.22 -1.08 -0.31 0.43 1.75 0.59 -1.13 -3.16 -0.55 -0.33 -0.59 1.17 0.41 -0.5 0.47 -1.35 -0.29 -0.16 -0.0 -2.17 -1.87 -1.77 0.53 0.33 0.14 0.89 0.98 0.79 -0.15 -0.33 0.21 0.24 -0.74 0.34 -0.43 -1.04 -4.38 -4.72 -2.36 -2.3 -1.84 -1.84 -3.19 -1.22
Solyc11g062380.1.1 (Solyc11g062380)
1.98 0.78 0.01 2.97 0.01 - -0.58 - - - - - 3.43 -1.2 -1.53 - -0.45 -1.43 1.79 -0.14 -0.18 - -1.12 -1.39 -1.25 -1.84 -1.83 - -0.81 -0.75 -0.36 -1.07 -3.0 - - -0.71 - - - 1.6 - -0.33 0.07 1.11 1.02 -2.18 - -1.06 2.74 -0.6 - -1.52 -2.32 - -0.17 -1.5 - -
1.12 -1.29 -0.75 3.28 2.37 - - -0.66 -4.16 -4.15 -3.35 - 1.63 -1.1 -3.25 -2.59 -0.41 -4.4 0.44 -0.87 0.09 0.03 -0.04 -0.23 -1.29 1.22 -1.43 -0.21 -0.02 -0.28 0.72 -0.34 -0.7 - - - 0.17 -1.69 - 0.79 0.26 -1.15 1.61 1.3 0.83 -1.46 - -1.91 1.8 0.25 0.42 - -2.19 -0.57 - - -2.42 -
Solyc12g013470.3.1 (Solyc12g013470)
- - -1.81 - - - 2.79 -2.91 - - - - 0.13 1.46 - -2.14 2.36 3.44 2.57 - -1.96 - - -1.58 -1.33 - - - -1.32 0.11 0.16 -1.98 -2.94 - - - - - 1.5 - 1.5 -4.09 - 1.54 - - - -0.61 3.2 0.88 - - -1.49 - - - - -
Solyc12g019955.1.1 (Solyc12g019955)
- - - - - - - - - - - - - 1.71 3.13 4.04 - 4.46 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.58 - - - 0.65 - - - - -
-0.03 2.37 0.25 3.19 - - - 2.42 1.59 - - - 2.55 0.53 - 0.84 - - 2.39 -0.21 - - - - -1.77 2.05 - -0.93 - - - -1.29 -0.75 - - - - - - - - - - - - - -1.36 - 3.19 - - - 1.33 - - - - -
- - - 3.02 2.16 - 1.66 - - - - - 1.49 -2.25 -2.7 -1.33 - - - - -0.74 - -0.38 -1.87 -0.77 -1.64 0.05 0.14 0.64 -1.4 0.47 -0.65 -0.71 - - - 1.91 - 3.38 2.11 - -0.66 - - 2.01 - -2.61 - 2.0 -2.11 -0.76 - 0.32 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.