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  5. Solyc08g065140.1.1

Solyc08g065140.1.1 (Solyc08g065140)


Aliases : Solyc08g065140

Description : no hits & (original description: none)


Gene families : OG0000261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g065140.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271680 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00030p00215650 NHL3,... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G27080 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Adi_g111045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17579 NHL3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05266.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05268.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05269.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55074.t1 NHL10, YLS9,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G026900.1 NHL25, Ceric.30G026900 not classified & original description: pacid=50608145... 0.02 OrthoFinder output from all 47 species
Ceric.35G052800.1 Ceric.35G052800 not classified & original description: pacid=50581572... 0.03 OrthoFinder output from all 47 species
Dcu_g06112 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_00037 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_04457 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_41030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g58860.1 LOC_Os04g58860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g09460.1 LOC_Os09g09460 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g05860.1 LOC_Os11g05860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Lfl_g19832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_118976g0010 NHL10, YLS9, ATNHL10 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g07369 NHL25 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc10g150145.1.1 NHL1, Solyc10g150145 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g22420 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008171_P001 Zm00001e008171 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041974_P001 Zm00001e041974 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 125 228
No external refs found!