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  5. Solyc08g061630.3.1

Solyc08g061630.3.1 (YLMG2, ATYLMG2, Solyc08g061630)


Aliases : YLMG2, ATYLMG2, Solyc08g061630

Description : YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana (sp|q9c595|ylmg2_arath : 190.0)


Gene families : OG0002185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g061630.3.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00238310 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT5G21920 YLMG2, ATYLMG2 YGGT family protein 0.12 OrthoFinder output from all 47 species
Adi_g046778 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08970 YLMG2, ATYLMG2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g04100 YLMG2, ATYLMG2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18000 YLMG2, ATYLMG2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g07670 YLMG2, ATYLMG2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g02771 YLMG2, ATYLMG2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene69409.t1 YLMG2, ATYLMG2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0018.g014976 No alias not classified & original description: CDS=84-614 0.03 OrthoFinder output from all 47 species
Ceric.12G048700.1 YLMG2, ATYLMG2,... not classified & original description: pacid=50602487... 0.13 OrthoFinder output from all 47 species
Cre02.g080250 YLMG1-2, ATYLMG1-2 No description available 0.04 OrthoFinder output from all 47 species
Cre12.g557050 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Cre16.g684300 YLMG2, ATYLMG2 No description available 0.04 OrthoFinder output from all 47 species
Dac_g14338 YLMG1-2, ATYLMG1-2 plastid-nucleoid partitioning factor *(YLMG1) & original... 0.03 OrthoFinder output from all 47 species
Dac_g31838 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09359 YLMG2, ATYLMG2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g02100 YLMG2, ATYLMG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01035473001 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_33767 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
LOC_Os03g08080.1 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
Len_g05180 YLMG2, ATYLMG2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g09688 YLMG1-2, ATYLMG1-2 plastid-nucleoid partitioning factor *(YLMG1) & original... 0.03 OrthoFinder output from all 47 species
Len_g18155 emb1990,... plastid-nucleoid partitioning factor *(YLMG1) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g05213 YLMG2, ATYLMG2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_9458287g0010 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp3g13060.1 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Mp8g11810.1 YLMG1-2, ATYLMG1-2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g10281 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11258 YLMG2, ATYLMG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18597 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18598 YLMG2, ATYLMG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18599 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11582 YLMG2, ATYLMG2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g06607 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31514 YLMG2, ATYLMG2 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014630 YLMG1-2, ATYLMG1-2 plastid-nucleoid partitioning factor *(YLMG1) & original... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016203 YLMG2, ATYLMG2 not classified & original description: CDS=1-753 0.05 OrthoFinder output from all 47 species
Sam_g06521 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo438165 YLMG1-2, ATYLMG1-2 YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g10431 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00523 YLMG2, ATYLMG2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e000570_P001 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Zm00001e038876_P002 Zm00001e038876 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003425 CCB3/YggT 133 196
No external refs found!