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  5. Solyc08g061240.3.1

Solyc08g061240.3.1 (Solyc08g061240)


Aliases : Solyc08g061240

Description : no hits & (original description: none)


Gene families : OG0000572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g061240.3.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT4G36610 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g08269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G032600.1 Ceric.07G032600 not classified & original description: pacid=50627659... 0.03 OrthoFinder output from all 47 species
Ceric.13G021400.1 Ceric.13G021400 not classified & original description: pacid=50636343... 0.02 OrthoFinder output from all 47 species
GSVIVT01009036001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01038796001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_34137 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g07420.1 LOC_Os01g07420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g44960.1 LOC_Os01g44960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g47780.1 LOC_Os02g47780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g08100.1 LOC_Os03g08100 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g08110.1 LOC_Os03g08110 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10425881g0040 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_119803g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g42438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g074220.4.1 Solyc04g074220 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g009000.2.1 Solyc11g009000 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g16627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015594_P002 Zm00001e015594 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e020374_P001 Zm00001e020374 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025866_P002 Zm00001e025866 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 49 148
No external refs found!