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  5. Solyc08g043180.3.1

Solyc08g043180.3.1 (Solyc08g043180)


Aliases : Solyc08g043180

Description : no hits & (original description: none)


Gene families : OG0006854 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g043180.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00127130 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G27390 No alias Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.1 OrthoFinder output from all 47 species
Aev_g43714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre13.g564050 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g07930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000003001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_06570 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g00746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo405914 No alias No description available 0.02 OrthoFinder output from all 47 species
Tin_g14643 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!