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  5. Solyc08g014510.3.1

Solyc08g014510.3.1 (Solyc08g014510)


Aliases : Solyc08g014510

Description : RNA editing factor (OZ-type)


Gene families : OG0001673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g014510.3.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g15963 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31737 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436123g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e012186_P004 Zm00001e012186 RNA editing factor (OZ-type) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 264 288
IPR001876 Znf_RanBP2 342 364
IPR001876 Znf_RanBP2 307 330
No external refs found!