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  5. Solyc08g008510.3.1

Solyc08g008510.3.1 (Solyc08g008510)


Aliases : Solyc08g008510

Description : Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana (sp|q9m0n1|pux10_arath : 408.0)


Gene families : OG0003017 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g008510.3.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT4G10790 No alias UBX domain-containing protein 0.04 OrthoFinder output from all 47 species
Aev_g28983 No alias substrate-to-CDC48 bridging factor *(PUX10) & original... 0.02 OrthoFinder output from all 47 species
Aop_g17434 No alias substrate-to-CDC48 bridging factor *(PUX10) & original... 0.02 OrthoFinder output from all 47 species
Cba_g06688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G095600.1 Ceric.01G095600 substrate-to-CDC48 bridging factor *(PUX10) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019629001 No alias Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g24950 No alias substrate-to-CDC48 bridging factor *(PUX10) & original... 0.03 OrthoFinder output from all 47 species
MA_10427593g0010 No alias Plant UBX domain-containing protein 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Smo164130 No alias Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR001012 UBX_dom 379 458
No external refs found!