Solyc08g008305.1.1 (Solyc08g008305)

Aliases : Solyc08g008305

Description : transcription factor (DREB)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g008305.1.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00185480	ERF-1, ATERF-1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AT5G61590	No alias	Integrase-type DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
Ala_g05002	HRE2	subgroup ERF-VII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g62202	No alias	subgroup ERF-III transcription factor & original...	0.05	OrthoFinder output from all 47 species
Azfi_s0119.g046680	No alias	subgroup ERF-IX transcription factor & original...	0.04	OrthoFinder output from all 47 species
Cba_g33790	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g09321	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.04	OrthoFinder output from all 47 species
Dcu_g04654	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.03	OrthoFinder output from all 47 species
Dcu_g13202	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Ehy_g00460	No alias	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01028312001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
LOC_Os02g54050.1	LOC_Os02g54050	Ethylene-responsive transcription factor ERF018...	0.03	OrthoFinder output from all 47 species
LOC_Os03g08460.1	RAP2.12, LOC_Os03g08460	Ethylene-responsive transcription factor ERF073...	0.02	OrthoFinder output from all 47 species
LOC_Os03g08500.2	RAP2.2, LOC_Os03g08500	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os04g46240.1	ERF5, ATERF-5,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os06g10780.1	LOC_Os06g10780	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
LOC_Os10g22600.1	LOC_Os10g22600	transcription factor (DREB)	0.09	OrthoFinder output from all 47 species
Lfl_g22601	No alias	subgroup ERF-I transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Lfl_g31233	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
MA_364562g0010	No alias	transcription factor (DREB)	0.06	OrthoFinder output from all 47 species
MA_436575g0010	TINY2	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Ppi_g08500	ERF110	subgroup ERF-X transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g005500.1.1	ERF14, ATERF14,...	transcription factor (ERF). transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Solyc03g118190.4.1	Solyc03g118190	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
Solyc08g078170.1.1	ERF-1, ATERF-1,...	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
Solyc09g066360.1.1	ERF1, ATERF1,...	transcription factor (ERF)	0.05	OrthoFinder output from all 47 species
Spa_g56271	WIN1, SHN1	subgroup ERF-V transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e026573_P001	Zm00001e026573	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Zm00001e031783_P001	ERF110, Zm00001e031783	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e033537_P001	ERF1, ATERF1,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	131	180

External Links

No external refs found!

Solyc08g008305.1.1 (Solyc08g008305)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation