Solyc08g007630.1.1 (Solyc08g007630)

Aliases : Solyc08g007630

Description : Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana (sp|q9lrr4|r13l1_arath : 565.0)

Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g007630.1.1

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01000635001	No alias	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
GSVIVT01000663001	No alias	Putative disease resistance protein At3g14460...	0.02	OrthoFinder output from all 47 species
GSVIVT01000840001	No alias	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum	0.03	OrthoFinder output from all 47 species
GSVIVT01001469001	No alias	Disease resistance protein RGA2 OS=Solanum bulbocastanum	0.03	OrthoFinder output from all 47 species
GSVIVT01001473001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
GSVIVT01004013001	No alias	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
GSVIVT01013307001	No alias	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
GSVIVT01022837001	No alias	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
GSVIVT01022856001	No alias	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
GSVIVT01022962001	No alias	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum	0.02	OrthoFinder output from all 47 species
GSVIVT01027276001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01031998001	No alias	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
GSVIVT01032183001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
GSVIVT01036628001	RPM1, RPS3	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
GSVIVT01037447001	No alias	Putative disease resistance protein At3g14460...	0.02	OrthoFinder output from all 47 species
LOC_Os04g43340.1	LOC_Os04g43340	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
LOC_Os05g34220.1	LOC_Os05g34220	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
LOC_Os09g14490.1	LOC_Os09g14490	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
Pir_g48709	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc11g065790.1.1	Solyc11g065790	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
Solyc11g071400.1.1	Solyc11g071400	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041118	Rx_N	11	105
IPR002182	NB-ARC	181	401
IPR001611	Leu-rich_rpt	585	642

External Links

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Solyc08g007630.1.1 (Solyc08g007630)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation