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  5. Solyc08g005970.3.1

Solyc08g005970.3.1 (ATPRMT5, PRMT5, SKB1,...)


Aliases : ATPRMT5, PRMT5, SKB1, Solyc08g005970

Description : arginine methyltransferase (PRMT5). histone methylase (CAU1)


Gene families : OG0005523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005523_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005970.3.1

Target Alias Description ECC score Gene Family Method Actions
AT4G31120 ATPRMT5, PRMT5, SKB1 SHK1 binding protein 1 0.05 OrthoFinder output from all 47 species
Aop_g04582 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17288 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021350.20 ATPRMT5, PRMT5, SKB1 External stimuli response.drought.stomatal closure... 0.01 OrthoFinder output from all 47 species
Dac_g02860 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04878 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01504 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_23660 ATPRMT5, PRMT5, SKB1 arginine methyltransferase (PRMT5). histone methylase (CAU1) 0.03 OrthoFinder output from all 47 species
LOC_Os02g04660.1 ATPRMT5, PRMT5,... arginine methyltransferase (PRMT5). histone methylase (CAU1) 0.04 OrthoFinder output from all 47 species
Len_g09204 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g20270.1 ATPRMT5, PRMT5, SKB1 arginine methyltransferase (PRMT5). histone methylase (CAU1) 0.03 OrthoFinder output from all 47 species
Msp_g15862 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13099 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08733 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01172 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.03 OrthoFinder output from all 47 species
Smo183431 ATPRMT5, PRMT5, SKB1 External stimuli response.drought.stomatal closure... 0.02 OrthoFinder output from all 47 species
Spa_g41746 ATPRMT5, PRMT5, SKB1 histone methylase *(CAU1/PRMT5) & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR035075 PRMT5 315 484
IPR035247 PRMT5_TIM 38 309
IPR035248 PRMT5_C 487 653
No external refs found!