1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g005640.4.1

Solyc08g005640.4.1 (KS, KS1, ATKS1, ATKS,...)


Aliases : KS, KS1, ATKS1, ATKS, GA2, Solyc08g005640

Description : mono-/sesquiterpene-/diterpene synthase. ent-kaurene synthase


Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005640.4.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Adi_g057757 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g083447 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08902 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10734 KS, KS1, ATKS1, ATKS, GA2 EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001155001 CPS, ATCPS1,... Phytohormones.gibberellin.synthesis.ent-copalyl... 0.03 OrthoFinder output from all 47 species
GSVIVT01036724001 KS, KS1, ATKS1, ATKS, GA2 Phytohormones.gibberellin.synthesis.ent-kaurene synthase 0.03 OrthoFinder output from all 47 species
Gb_04666 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
Gb_38696 TPS02 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os04g10060.1 KS, KS1, ATKS1,... ent-kaurene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os11g28530.2 KS, KS1, ATKS1,... ent-kaurene synthase 0.02 OrthoFinder output from all 47 species
Lfl_g30809 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10425884g0020 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
MA_10433916g0010 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
MA_10435706g0010 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Mp6g05430.1 TPS04, TPS4, GES Bifunctional levopimaradiene synthase, chloroplastic... 0.02 OrthoFinder output from all 47 species
Nbi_g22166 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29991 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29992 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33487 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35982 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37904 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38613 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53084 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040178_P002 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
Zm00001e040179_P001 KS, KS1, ATKS1,... ent-kaurene synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 99 298
IPR005630 Terpene_synthase_metal-bd 342 607
No external refs found!