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Aliases : KS, KS1, ATKS1, ATKS, GA2, Solyc08g005635
Description : Beta-phellandrene synthase (neryl-diphosphate-cyclizing), chloroplastic OS=Solanum lycopersicum (sp|c1k5m3|phs1_sollc : 241.0)
Gene families : OG0006488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006488_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc08g005635.1.1 | |
| Cluster | HCCA: Cluster_98 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dac_g14672 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21648 | CPS, ATCPS1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g29134 | CPS, ATCPS1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g30449 | CPS, ATCPS1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01006487001 | TPS04, TPS4, GES | S-linalool synthase OS=Clarkia breweri | 0.03 | OrthoFinder output from all 47 species | |
| Gb_05029 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06744 | No alias | mono-/sesquiterpene-/diterpene synthase. ent-copalyl... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10756 | No alias | Bifunctional levopimaradiene synthase, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_12468 | TPS02 | mono-/sesquiterpene-/diterpene synthase | 0.06 | OrthoFinder output from all 47 species | |
| Gb_13713 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_17366 | CPS, ATCPS1,... | mono-/sesquiterpene-/diterpene synthase | 0.04 | OrthoFinder output from all 47 species | |
| Gb_17941 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36202 | KS, KS1, ATKS1, ATKS, GA2 | Alpha-bisabolene synthase OS=Abies grandis... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_39147 | CPS, ATCPS1,... | ent-copalyl diphosphate synthase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g30800.1 | KS, KS1, ATKS1,... | Ent-sandaracopimara-8(14),15-diene synthase OS=Oryza... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g37092 | CPS, ATCPS1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10435334g0020 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_152325g0010 | KS, KS1, ATKS1, ATKS, GA2 | Alpha-bisabolene synthase OS=Abies grandis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_34273g0020 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g31705 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g31801 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g34951 | CPS, ATCPS1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g36956 | CPS, ATCPS1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g03163 | CPS, ATCPS1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g08618 | CPS, ATCPS1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63465 | CPS, ATCPS1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| MF | GO:0010333 | terpene synthase activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |