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  5. Solyc08g005450.3.1

Solyc08g005450.3.1 (CXIP4, Solyc08g005450)


Aliases : CXIP4, Solyc08g005450

Description : CAX-interacting protein 4 OS=Arabidopsis thaliana (sp|q84y18|cxip4_arath : 178.0)


Gene families : OG0005105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005450.3.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g00773 CXIP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0099.g044094 CXIP4 not classified & original description: CDS=1-1182 0.02 OrthoFinder output from all 47 species
Dde_g21642 CXIP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05300 CXIP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g05800.1 CXIP4 CAX-interacting protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g06718 CXIP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009449_P001 CXIP4, Zm00001e009449 CAX-interacting protein 4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e033521_P001 CXIP4, Zm00001e033521 CAX-interacting protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!