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  5. Solyc07g066080.3.1

Solyc07g066080.3.1 (ATUBC11, UBC11, Solyc07g066080)


Aliases : ATUBC11, UBC11, Solyc07g066080

Description : conjugation E2 protein


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g066080.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00068850 ATUBC11, UBC11,... Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
AT1G64230 UBC28 ubiquitin-conjugating enzyme 28 0.03 OrthoFinder output from all 47 species
Aev_g46322 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Als_g43928 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01010 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08036.t1 ATUBC11, UBC11,... E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0046.g030220 UBC37 not classified & original description: CDS=43-1539 0.03 OrthoFinder output from all 47 species
Azfi_s0155.g053654 UBC9 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Ceric.38G046500.1 ATUBC11, UBC11,... E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Dcu_g04261 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os02g02830.1 UBC9, LOC_Os02g02830 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Len_g18449 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38609 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000340 EMB144, CIN4, COP10, FUS9 accessory component *(GUN4) of magnesium-chelatase... 0.02 OrthoFinder output from all 47 species
Solyc10g011740.3.1 UBC10, Solyc10g011740 conjugation E2 protein 0.04 OrthoFinder output from all 47 species
Spa_g02567 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006609_P001 UBC10, Zm00001e006609 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Zm00001e027303_P001 ATUBC11, UBC11,... conjugation E2 protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005758 mitochondrial intermembrane space IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0016530 metallochaperone activity IEP HCCA
MF GO:0016531 copper chaperone activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0031970 organelle envelope lumen IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!