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  5. Solyc07g065120.3.1

Solyc07g065120.3.1 (SVL1, Solyc07g065120)


Aliases : SVL1, Solyc07g065120

Description : Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana (sp|q9fj62|gpdl4_arath : 832.0)


Gene families : OG0002387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g065120.3.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00174750 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.04 OrthoFinder output from all 47 species
AMTR_s00252p00015420 SVL4,... Glycerophosphodiester phosphodiesterase GDPDL6... 0.05 OrthoFinder output from all 47 species
AT1G66980 SNC4 suppressor of npr1-1 constitutive 4 0.03 OrthoFinder output from all 47 species
AT4G26690 GPDL2, SHV3, MRH5 PLC-like phosphodiesterase family protein 0.16 OrthoFinder output from all 47 species
AT5G58050 SVL4 SHV3-like 4 0.04 OrthoFinder output from all 47 species
AT5G58170 SVL5 SHV3-like 5 0.04 OrthoFinder output from all 47 species
Adi_g059201 SVL5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g106144 SVL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15087 GPDL2, SHV3, MRH5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g40029 GPDL2, SHV3, MRH5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g05086 SVL5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08832 SVL4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54679.t1 SVL4, Aspi01Gene54679 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15330 GPDL2, SHV3, MRH5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23324 SVL4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07994 SVL4 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_10598 SVL1 Glycerophosphodiester phosphodiesterase GDPDL4... 0.04 OrthoFinder output from all 47 species
Gb_18319 SVL1 Glycerophosphodiester phosphodiesterase GDPDL4... 0.06 OrthoFinder output from all 47 species
LOC_Os02g09450.1 SVL5, LOC_Os02g09450 Glycerophosphodiester phosphodiesterase GDPDL7... 0.04 OrthoFinder output from all 47 species
LOC_Os02g37590.1 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.04 OrthoFinder output from all 47 species
LOC_Os04g39610.1 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL4... 0.03 OrthoFinder output from all 47 species
LOC_Os08g39350.1 SVL1, LOC_Os08g39350 Glycerophosphodiester phosphodiesterase GDPDL4... 0.05 OrthoFinder output from all 47 species
Len_g08984 SVL5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g07811 SVL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20356 SVL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434415g0020 SNC4 Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4... 0.02 OrthoFinder output from all 47 species
Msp_g26126 SVL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10791 SVL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26745 SVL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05893 SVL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021443 SVL5 not classified & original description: CDS=22-1383 0.04 OrthoFinder output from all 47 species
Solyc02g014490.4.1 SVL4, Solyc02g014490 Glycerophosphodiester phosphodiesterase GDPDL7... 0.05 OrthoFinder output from all 47 species
Solyc02g014530.4.1 SVL4, Solyc02g014530 Glycerophosphodiester phosphodiesterase GDPDL6... 0.04 OrthoFinder output from all 47 species
Solyc12g014570.2.1 SVL1, Solyc12g014570 Glycerophosphodiester phosphodiesterase GDPDL4... 0.05 OrthoFinder output from all 47 species
Spa_g21490 SVL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40260 SVL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e025069_P001 SVL5, Zm00001e025069 Glycerophosphodiester phosphodiesterase GDPDL7... 0.02 OrthoFinder output from all 47 species
Zm00001e041063_P001 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0008081 phosphoric diester hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 363 649
No external refs found!