Solyc07g064180.4.1 (ATPMEPCRA, PMEPCRA,...)

Aliases : ATPMEPCRA, PMEPCRA, Solyc07g064180

Description : pectin methylesterase

Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g064180.4.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00033p00227850	evm_27.TU.AmTr_v1...	Probable pectinesterase/pectinesterase inhibitor 21...	0.03	OrthoFinder output from all 47 species
AMTR_s00105p00078750	PME44, ATPME44,...	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
AMTR_s00129p00035520	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.04	OrthoFinder output from all 47 species
AMTR_s00129p00047530	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
AT1G23200	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.05	OrthoFinder output from all 47 species
AT2G45220	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	OrthoFinder output from all 47 species
AT5G27870	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	OrthoFinder output from all 47 species
Aev_g12203	PME1, ATPME1	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Ala_g24092	PME44, ATPME44	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Als_g08288	ATPMEPCRF, PMEPCRF	EC_3.1 hydrolase acting on ester bond & original...	0.04	OrthoFinder output from all 47 species
Als_g35709	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene05823.t1	Aspi01Gene05823	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene07383.t1	ATPMEPCRF,...	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene07398.t1	ATPMEPCRF,...	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Cba_g08092	ATPMEPCRF, PMEPCRF	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Ceric.19G055900.1	Ceric.19G055900	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Ceric.19G056100.1	ATPMEPCRF,...	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Dcu_g01562	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Dde_g21301	ATPMEPCRF, PMEPCRF	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Ehy_g04854	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Ehy_g08496	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Ehy_g09155	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01015000001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
GSVIVT01026518001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
GSVIVT01027653001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
GSVIVT01028041001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
Gb_10523	ATPME3, PME3	pectin methylesterase	0.04	OrthoFinder output from all 47 species
LOC_Os07g49100.1	LOC_Os07g49100	pectin methylesterase	0.02	OrthoFinder output from all 47 species
LOC_Os08g34910.1	LOC_Os08g34910	pectin methylesterase	0.02	OrthoFinder output from all 47 species
LOC_Os11g08750.1	LOC_Os11g08750	pectin methylesterase	0.03	OrthoFinder output from all 47 species
LOC_Os11g36240.1	LOC_Os11g36240	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Len_g10067	ATPMEPCRF, PMEPCRF	EC_3.1 hydrolase acting on ester bond & original...	0.04	OrthoFinder output from all 47 species
MA_51464g0010	ATPMEPCRB	pectin methylesterase	0.04	OrthoFinder output from all 47 species
MA_86577g0010	ATPMEPCRB	pectin methylesterase	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010222	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Smo89509	ATPME2, PME2	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
Solyc01g099940.3.1	Solyc01g099940	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Tin_g02036	ATPMEPCRF, PMEPCRF	EC_3.1 hydrolase acTing on ester bond & original...	0.03	OrthoFinder output from all 47 species
Tin_g15500	ATPMEPCRF, PMEPCRF	EC_3.1 hydrolase acTing on ester bond & original...	0.04	OrthoFinder output from all 47 species
Zm00001e017514_P001	ATPMEPCRB, Zm00001e017514	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Zm00001e026790_P001	ATPMEPCRB, Zm00001e026790	pectin methylesterase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140678	molecular function inhibitor activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	237	533
IPR006501	Pectinesterase_inhib_dom	52	195

External Links

No external refs found!

Solyc07g064180.4.1 (ATPMEPCRA, PMEPCRA,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation