Solyc07g064170.3.1 (ATPMEPCRA, PMEPCRA,...)

Aliases : ATPMEPCRA, PMEPCRA, Solyc07g064170

Description : pectin methylesterase

Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g064170.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00033p00227850	evm_27.TU.AmTr_v1...	Probable pectinesterase/pectinesterase inhibitor 21...	0.05	OrthoFinder output from all 47 species
AMTR_s00105p00078750	PME44, ATPME44,...	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
AMTR_s00129p00035520	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.05	OrthoFinder output from all 47 species
AMTR_s00129p00036660	evm_27.TU.AmTr_v1...	Probable pectinesterase/pectinesterase inhibitor 12...	0.03	OrthoFinder output from all 47 species
AT1G23200	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.04	OrthoFinder output from all 47 species
AT2G45220	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	OrthoFinder output from all 47 species
AT3G47400	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	OrthoFinder output from all 47 species
AT4G15980	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.04	OrthoFinder output from all 47 species
AT5G49180	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	OrthoFinder output from all 47 species
AT5G51500	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	OrthoFinder output from all 47 species
Ala_g32996	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g19937	ATPMEPCRF, PMEPCRF	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene05823.t1	Aspi01Gene05823	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene07382.t1	Aspi01Gene07382	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene07383.t1	ATPMEPCRF,...	EC_3.1 hydrolase acting on ester bond & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene07394.t1	Aspi01Gene07394	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene07398.t1	ATPMEPCRF,...	EC_3.1 hydrolase acting on ester bond & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene10964.t1	Aspi01Gene10964	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene39882.t1	Aspi01Gene39882	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene45157.t1	ATPME2, PME2,...	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0205.g057784	ATPME2, PME2	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Azfi_s1989.g108563	No alias	pectin methylesterase & original description: CDS=1-588	0.03	OrthoFinder output from all 47 species
Ceric.19G055900.1	Ceric.19G055900	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Ceric.30G016500.1	Ceric.30G016500	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Ceric.30G016600.1	Ceric.30G016600	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Dac_g15947	ATPME2, PME2	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Dac_g45482	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Dcu_g01562	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Dde_g21301	ATPMEPCRF, PMEPCRF	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Ehy_g03889	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Ehy_g08496	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01015000001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
GSVIVT01026518001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
GSVIVT01027653001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.04	OrthoFinder output from all 47 species
GSVIVT01037349001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
Gb_03174	ATPME3, PME3	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Gb_10523	ATPME3, PME3	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Gb_28159	ATPMEPCRF, PMEPCRF	pectin methylesterase	0.04	OrthoFinder output from all 47 species
LOC_Os11g07090.1	LOC_Os11g07090	pectin methylesterase	0.03	OrthoFinder output from all 47 species
LOC_Os11g08750.1	LOC_Os11g08750	pectin methylesterase	0.03	OrthoFinder output from all 47 species
LOC_Os11g36240.1	LOC_Os11g36240	pectin methylesterase	0.03	OrthoFinder output from all 47 species
MA_177306g0010	ATPME2, PME2	pectin methylesterase	0.04	OrthoFinder output from all 47 species
MA_67675g0010	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
MA_84680g0010	ATPME2, PME2	pectin methylesterase	0.03	OrthoFinder output from all 47 species
MA_86577g0010	ATPMEPCRB	pectin methylesterase	0.03	OrthoFinder output from all 47 species
MA_8928694g0010	No alias	Probable pectinesterase/pectinesterase inhibitor 32...	0.02	OrthoFinder output from all 47 species
Nbi_g19805	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Ore_g20165	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010222	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021279	ATPMEPCRF, PMEPCRF	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Smo420760	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
Smo89509	ATPME2, PME2	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
Solyc01g091050.4.1	Solyc01g091050	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Solyc06g034360.2.1	Solyc06g034360	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Spa_g06048	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Tin_g02036	ATPMEPCRF, PMEPCRF	EC_3.1 hydrolase acTing on ester bond & original...	0.03	OrthoFinder output from all 47 species
Zm00001e017514_P001	ATPMEPCRB, Zm00001e017514	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Zm00001e022184_P001	PME44, ATPME44,...	pectin methylesterase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140678	molecular function inhibitor activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	233	529
IPR006501	Pectinesterase_inhib_dom	48	190

External Links

No external refs found!

Solyc07g064170.3.1 (ATPMEPCRA, PMEPCRA,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation