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  5. Solyc07g063970.3.1

Solyc07g063970.3.1 (Solyc07g063970)


Aliases : Solyc07g063970

Description : C2H2 zinc finger transcription factor


Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g063970.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00197580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AT1G11490 No alias zinc finger (C2H2 type) family protein 0.01 OrthoFinder output from all 47 species
Aev_g16997 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g05965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_25842 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Gb_30270 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Gb_32897 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os01g57650.1 LOC_Os01g57650 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
LOC_Os03g15790.1 LOC_Os03g15790 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
LOC_Os04g59380.1 LOC_Os04g59380 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
MA_10426153g0010 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g13834 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g27885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014168 No alias not classified & original description: CDS=1-1884 0.01 OrthoFinder output from all 47 species
Zm00001e019606_P002 Zm00001e019606 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!