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Aliases : AtOCT4, 4-Oct, Solyc07g063920
Description : organic cation transporter (OCT)
Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc07g063920.3.1 | |
| Cluster | HCCA: Cluster_98 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00032p00186620 | 3-Oct, ATOCT3,... | Solute transport.carrier-mediated transport.MFS... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G79410 | AtOCT5, 5-Oct | organic cation/carnitine transporter5 | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g21954 | AtOCT4, 4-Oct | organic cation transporter *(OCT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g70561 | AtOCT4, 4-Oct | organic cation transporter *(OCT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene58798.t1 | AtOCT4, 4-Oct,... | organic cation transporter *(OCT) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G085500.1 | AtOCT4, 4-Oct,... | organic cation transporter *(OCT) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.12G086100.1 | AtOCT4, 4-Oct,... | organic cation transporter *(OCT) & original... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g10267 | AtOCT4, 4-Oct | organic cation transporter *(OCT) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g08973 | AtOCT4, 4-Oct | organic cation transporter *(OCT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g39356 | AtOCT4, 4-Oct | organic cation transporter *(OCT) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10436973g0010 | AtOCT1, 1-Oct | organic cation transporter (OCT) | 0.02 | OrthoFinder output from all 47 species | |
| MA_114982g0010 | AtOCT1, 1-Oct | organic cation transporter (OCT) | 0.04 | OrthoFinder output from all 47 species | |
| Mp8g15970.1 | AtOCT4, 4-Oct | organic cation transporter (OCT) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g31037 | AtOCT4, 4-Oct | organic cation transporter *(OCT) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41926 | AtOCT4, 4-Oct | organic cation transporter *(OCT) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013040 | AtOCT4, 4-Oct | organic cation transporter *(OCT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g053860.4.1 | 3-Oct, ATOCT3,... | organic cation transporter (OCT) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g074850.3.1 | 3-Oct, ATOCT3,... | Organic cation/carnitine transporter 2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g017380.3.1 | 3-Oct, ATOCT3,... | organic cation transporter (OCT) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0022857 | transmembrane transporter activity | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| MF | GO:0008146 | sulfotransferase activity | IEP | HCCA |
| MF | GO:0010333 | terpene synthase activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005828 | MFS_sugar_transport-like | 104 | 514 |
| No external refs found! |