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  5. Solyc07g062790.1.1

Solyc07g062790.1.1 (ATHB52, HB52, Solyc07g062790)


Aliases : ATHB52, HB52, Solyc07g062790

Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g062790.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00085160 ATHB1, ATHB-1,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT1G27045 No alias Homeobox-leucine zipper protein family 0.05 OrthoFinder output from all 47 species
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.02 OrthoFinder output from all 47 species
AT3G01220 ATHB20, HB20 homeobox protein 20 0.02 OrthoFinder output from all 47 species
AT5G53980 ATHB52, HB52 homeobox protein 52 0.02 OrthoFinder output from all 47 species
AT5G66700 ATHB53, HB53, HB-8 homeobox 53 0.05 OrthoFinder output from all 47 species
Adi_g016627 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g020723 HB51, ATHB51, LMI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022689 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g054904 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g082074 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g09873 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g11443 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31735.t2 ATHB5, ATHB-5,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g35111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14797 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dac_g34453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07592 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01032491001 ATHB1, ATHB-1,... RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
Gb_07209 ATHB3, HB-3, ATHB-3, HAT7 Homeobox-leucine zipper protein HAT7 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Gb_35116 AtHB23, HB23 transcription factor (HD-ZIP I/II) 0.06 OrthoFinder output from all 47 species
Gb_35959 ATHB40, HB40, HB-5 transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Gb_39722 ATHB13 transcription factor (HD-ZIP I/II) 0.1 OrthoFinder output from all 47 species
LOC_Os02g43330.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08960.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os03g10210.1 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45810.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os08g32080.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
LOC_Os08g32085.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
LOC_Os10g23090.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
Len_g29447 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Lfl_g11869 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_128g0010 ATHB13 transcription factor (HD-ZIP I/II) 0.07 OrthoFinder output from all 47 species
MA_132936g0010 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
MA_19453g0050 ATHB1, ATHB-1,... Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_441783g0010 AtHB23, HB23 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g05256 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ore_g03345 HB6, ATHB6 regulatory protein *(LMI1) of floral meristem identity... 0.04 OrthoFinder output from all 47 species
Ore_g03346 HB6, ATHB6 regulatory protein *(LMI1) of floral meristem identity... 0.04 OrthoFinder output from all 47 species
Ore_g29369 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g06112 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g07960 ATHB3, HB-3, ATHB-3, HAT7 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Pnu_g07961 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Pnu_g15485 ATHB13 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Pnu_g32938 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo81609 ATHB16, HB16, ATHB-16 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Solyc01g010600.4.1 AtHB23, HB23,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Solyc02g067410.2.1 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.05 OrthoFinder output from all 47 species
Spa_g02959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05577 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g25046 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g09467 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000532_P002 ATHB13, Zm00001e000532 transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Zm00001e007381_P001 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e009770_P001 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e022379_P002 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 17 71
No external refs found!